Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00272 ATGGAAGATCAAAATGGTTCCAAGGGATTTGGCAAAGGGTTCCGCAAGGTTAAGCCTTACCTTGCTATGGTGTCCCTTCAGTTTGGTTACTCAGGAATGTACATCATCACCATGGTTTCTTTCAAGCATGGCATGAGCCATTGGGTACTCTCAGTCTACCGTCATATAGTTGCCACTCTCATCATGGCCCCTTTTGCATTTTTCCTTGAAAGAAAAATACGACCAAAGATGACACTCCCTGTGTTCCTGAGGCTAGCGGCTCTTGGTTTCGTTGAGCCAGTGCTTGACCAAAACTTGTACAACATGGGGATGAAGAACACCTCAACAACGTTCGCATCGGCCACAGTTAATGTTCTCCCAGCCATTACTTTTATAATGGCACTTATTTTCAGGTTAGAGACAGTGAATTTGAGAAAAATACACAGCGTGGCCAAGGTAATTGGAACTGCAGTAACAGTCACAGGAGCCATGGTTATGACTTTGTACAAAGGCTCTGCTCTTCAGTTCGTCAAGGGTCAAGCAACCCACCATGAAAGTGGCAGCACCACACAACCCTCTGAACAAAACTGGGTGCTTGGCACAGTAATGCTCCTAGCAAGTTGTGGTGGTTGGGCTAGTTTCTTTATCTTGCAATCTTTCACGTTGAAGATGTACCCTGCAGAGCTCTCAGTCACAGCTTGGATTTGCTTTTTGGGTATTTTTGAGGGTTCAATTGCAGCCCTTATATTTGAACGTGACATGAGTGTGTGGTCCATAGGCATGGACTCAAGGCTCCTTGCTTGTGTTTATTCTGGTGTGGTGTGTTCTGGAATGGCATACTATGTACAAGGAGTTGTGACCAGGGAACGTGGACCCGTGTTTGTGACTTCTTTCAGTCCACTGTGTATGATTATCACTGCTGCATTGGGATCCATCGTCTTGGCTGAACAAGTTTACATGGGAAGTGTAATTGGAGCTATCATCATTGTGAGTGGGCTTTATACAGTGGTATGGGGAAAAAGCAAAGACAACGTGAACAAAACCGATGCAGAGAAAAGTGAAGCCCAAGAATTGCCAATTAAGGAGAGTGCAGCATCAGTATCAGGCATTTTTGACAGCATTGAGATAAATGTTTCTACTGGGGCAGGAAAGAATGTGGTTGCATCACCAAGAACATAA 1158 0.4473 MEDQNGSKGFGKGFRKVKPYLAMVSLQFGYSGMYIITMVSFKHGMSHWVLSVYRHIVATLIMAPFAFFLERKIRPKMTLPVFLRLAALGFVEPVLDQNLYNMGMKNTSTTFASATVNVLPAITFIMALIFRLETVNLRKIHSVAKVIGTAVTVTGAMVMTLYKGSALQFVKGQATHHESGSTTQPSEQNWVLGTVMLLASCGGWASFFILQSFTLKMYPAELSVTAWICFLGIFEGSIAALIFERDMSVWSIGMDSRLLACVYSGVVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQVYMGSVIGAIIIVSGLYTVVWGKSKDNVNKTDAEKSEAQELPIKESAASVSGIFDSIEINVSTGAGKNVVASPRT* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00272 385 Pfam EamA-like transporter family 31 150 IPR000620 GO:0016020
Lapu8g00272 385 Pfam EamA-like transporter family 193 330 IPR000620 GO:0016020
Lapu8g00272 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Lapu8g00272 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 334 - -
Lapu8g00272 385 PANTHER WAT1-RELATED PROTEIN 18 342 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00272 Lapu-Chr8 15345498 15350035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00272 11 370 Nodulin-like Gene Family AT4G08300 63.085 1.74e-168 474