Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00259 ATGACGAACCGTAATGTGAATAACACACTTCTGGAGTTTGCAATGTGGATTTCAAACTCGAATGCTCTACCTAGAGCTGCAGTGCCTGGTATAATGGCTTTACTTGGTGGGGTTTTAGGCCTATCCCAGAAAAAGCTCTTATTGAAAACTTTGGAGGATGGAAGTGGAAAAGGAGGAACCAAAGTTAACACATGGCTTGATTCAATGAGAGCTTCTTCTCCCACTCGAGTCAAATCCACACAGAACCAAGACCCGAGTCCTTGGACTCTTTACCACCCTTCGGCACTGAACCTGTTTGATCAGATTGTATGTGAGTCCAAAGGGAAGCAGATTGTCACTTTTCTTGACTATGATGGAACTCTATCCCCAATTGTTGCAGACCCAGATAAAGCATACATGAGTCAAAAGATGAGGGCCACATTGAAGGACATAGCAAGACATTTCCCCACTGCCATCGTGAGTGGAAGGTGCATAGACAAGGTGTATAACTTTGTGAGATTGGCAGAACTGTACTATGCTGGGAGCCATGGGATGGACATCAAGGGACCAACAAATAGGCGAAGTACTAAGAAAGGAAACGAACAAGTACTCTTCCAAGCCGCGAGTGAATTCTTACCCATGATCAATGAGGTGTACAACATCTTGGTGGAAAAAACAAAGCCTGTCCCGGGGGCTAAGGTAGAAAATAACAAGTTTTGTTTGTCCGTGCACTTTCGCTGTGTTGACGAAAAGAGTTGGGAATCATTGGCCGAACAAGTTAGCTTGGTCCTCCATGACTACCCCAAACTTAAGCTAACTGAAGGGAGAAAAGTGCTTGAGATTCGACCAACTATAAAATGGGACAAGGGCAAGGCTCTTGAATTCTTGCTAGAATCACTGGGATATGGTAACTCTGACAATGTATTTCCAATCTATATTGGTGATGATCGAACCGACGAAGATGCTTTTAAGGTTTTACGGAAGAGGGGCCAAGGGATTGGGATTCTTGTTTCTAAAATTCCAAAAGAAACCGATGCTTCCTACACTTTGCAAGATCCAAGTGAGGTTGGGCAGTTTTTGCGGCATTTGGTGGAGTGGAAAAGAACGAGTACCCAATACCACAAGTTGTAG 1110 0.4405 MTNRNVNNTLLEFAMWISNSNALPRAAVPGIMALLGGVLGLSQKKLLLKTLEDGSGKGGTKVNTWLDSMRASSPTRVKSTQNQDPSPWTLYHPSALNLFDQIVCESKGKQIVTFLDYDGTLSPIVADPDKAYMSQKMRATLKDIARHFPTAIVSGRCIDKVYNFVRLAELYYAGSHGMDIKGPTNRRSTKKGNEQVLFQAASEFLPMINEVYNILVEKTKPVPGAKVENNKFCLSVHFRCVDEKSWESLAEQVSLVLHDYPKLKLTEGRKVLEIRPTIKWDKGKALEFLLESLGYGNSDNVFPIYIGDDRTDEDAFKVLRKRGQGIGILVSKIPKETDASYTLQDPSEVGQFLRHLVEWKRTSTQYHKL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00259 369 NCBIfam trehalose-phosphatase 109 357 IPR003337 GO:0003824|GO:0005992
Lapu8g00259 369 FunFam Trehalose 6-phosphate phosphatase 207 366 - -
Lapu8g00259 369 FunFam Trehalose 6-phosphate phosphatase 111 197 - -
Lapu8g00259 369 Pfam Trehalose-phosphatase 114 347 IPR003337 GO:0003824|GO:0005992
Lapu8g00259 369 Gene3D - 228 368 IPR023214 -
Lapu8g00259 369 Gene3D - 111 207 IPR023214 -
Lapu8g00259 369 NCBIfam HAD-IIB family hydrolase 114 321 IPR006379 -
Lapu8g00259 369 SUPERFAMILY HAD-like 114 360 IPR036412 -
Lapu8g00259 369 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 55 367 IPR044651 GO:0004805|GO:0005992
Lapu8g00259 369 CDD HAD_TPP 114 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00259 Lapu-Chr8 14832447 14835126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00259 107 356 Trehalose Biosynthesis Gene Families AT1G70290 27.170 9.32e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00259 K01087 - gmx:100792915 677.552