Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00256 ATGGCAGCTATGATGGATTTCTACAACGGACAACCACAAGTTCAGTCGGATCCATTCAGAGGTGAGCTGATGGAAGTTCTAGAAACTTTTATGAAAAGTCCTTCCTCAACTTCAGATTCACCTTTGCCTTCAACTTCAACTTCGACTTCGACTTCATATTCCTACTCTCCTTCCCCTCTTTCTCTCCCTCCACACCCCAATTTCTACCCAGACCCTTCCTCCTCCTACCTGTTCCAAACCCAAACCTTAATAGGCTTTCAACAGCAACCCGCTTCTGTTCTCGGGCTGAACAACCTAAGCCCGTTTCAGGTTTCTCAGATCCAGGCTCAGATCCAGGCCCAGGCCCAGAGTCATACCTCCCTCTCCCTCAACTTCCTCGGCCCGAAGCCCGTGCCCATGAAGCAAGTGGGTGGGCCTCCGAAGCCCCTGAAGCTGTACCGCGGGGTGAGGCAGAGGCATTGGGGAAAGTGGGTGGCGGAGATAAGACTCCCCAAGAACCGAACCAGGCTCTGGCTCGGAACCTTCGACACTGCAGAGGAAGCCGCTTTGGCGTACGACAAAGCCGCGTACAGACTCCGAGGCGACTTCGCCAGGCTCAACTTCCCGAACCTCAAAGGCTCGTGCCTCGGCGAGTACAAGCCTCTGCAGTCCGCCGTGGACGCTAAGCTCGACGCCATTTGTCAGAGCCTGGCCGAAATGCCGAAGCAGGGGAAGACGGAGAAGGGTGCCAGGTCATCATCCAAGAAGTCAAAAACAGCTCAAAAGGAGGCTCGGAATCCGAACCAGGACGCCAACCCGAACCCGAACATTTCTTGCAAGGCGGAACCGGAACCCGAACCTGCTCTGTCTCCTGAAAGTGAGGGTTCTGTGGATTCTTCTCCGCTCTCTGATCTCACCTTTGACCTCACCGAGCCGCAATGGGAAGATGCTTCTGCACATTTTAACTTGCAGAAATTTCCTTCTTATGAGATCGATTGGGATTCTCTCTGA 990 0.5384 MAAMMDFYNGQPQVQSDPFRGELMEVLETFMKSPSSTSDSPLPSTSTSTSTSYSYSPSPLSLPPHPNFYPDPSSSYLFQTQTLIGFQQQPASVLGLNNLSPFQVSQIQAQIQAQAQSHTSLSLNFLGPKPVPMKQVGGPPKPLKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYRLRGDFARLNFPNLKGSCLGEYKPLQSAVDAKLDAICQSLAEMPKQGKTEKGARSSSKKSKTAQKEARNPNQDANPNPNISCKAEPEPEPALSPESEGSVDSSPLSDLTFDLTEPQWEDASAHFNLQKFPSYEIDWDSL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00256 329 FunFam Ethylene-responsive transcription factor 2 144 203 - -
Lapu8g00256 329 ProSiteProfiles AP2/ERF domain profile. 145 202 IPR001471 GO:0003700|GO:0006355
Lapu8g00256 329 MobiDBLite consensus disorder prediction 286 300 - -
Lapu8g00256 329 Pfam AP2 domain 146 194 IPR001471 GO:0003700|GO:0006355
Lapu8g00256 329 MobiDBLite consensus disorder prediction 237 256 - -
Lapu8g00256 329 SMART rav1_2 145 208 IPR001471 GO:0003700|GO:0006355
Lapu8g00256 329 CDD AP2 144 204 IPR001471 GO:0003700|GO:0006355
Lapu8g00256 329 SUPERFAMILY DNA-binding domain 145 203 IPR016177 GO:0003677
Lapu8g00256 329 MobiDBLite consensus disorder prediction 32 66 - -
Lapu8g00256 329 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 329 - -
Lapu8g00256 329 MobiDBLite consensus disorder prediction 32 58 - -
Lapu8g00256 329 MobiDBLite consensus disorder prediction 234 304 - -
Lapu8g00256 329 PRINTS Ethylene responsive element binding protein signature 146 157 IPR001471 GO:0003700|GO:0006355
Lapu8g00256 329 PRINTS Ethylene responsive element binding protein signature 168 184 IPR001471 GO:0003700|GO:0006355
Lapu8g00256 329 Gene3D AP2/ERF domain 145 203 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00256 Lapu-Chr8 14749137 14751011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00256 1 329 AP2-EREBP Transcription Factor Family AT1G78080 48.468 5.06e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu8g00256 AP2 1.3e-14 CL0081