Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00215 ATGAATCACCTACCTCGACTATTCGGCAATAGAAACAAACCTCCAAACATGGATCCCAGGAAGAGCAAGACGCGAGCCAAGAAGCAGCAGCCTAAGCTCGAGCGCCGCAACGCCGCCAAGCACTTCGAATACGACGCCGGATCGCCGTCCTCATCGCGCGGTGACTCCGCCTCCGCCTCGACGTCGTCTTCCTCGTTGTCTTCGCTCTACACGCGCTCCATGGACTTGTATGACCGCACGAGCTTCCGAATCGAGGGCGTGGAGGGCGAGTTCGACCGGATTTGCCGCAGGCTCGGCCTGTCCGGTCCGGAGGATTTCTCCATTCCGGCCGCCGCCTGGGAGGCCATGAAACTCCGCTCCTCCTCCGACTTCCCGTCGCTCCGGAACCACGACGGTATGGAGTTCGACGAGGGGGCCAAGGAGAAGAAGAAAATTGAAGCGGTGGAGAGCGAGGATCGGGCTAGGGTTTTGGATGAGTGTGTTATTCCTGCTGACAGTAGTGGTTGCTGCACCACTGGCGGCGGCGGCGGCAGCGGAATTAAGGGTTTTCGGCCTCCGATGCTCAAGCCGCCGCCGGGGGTTAGAGTTTTGGTGGTTGACGAAACGTGTTCCACGTGGGATTTGTTGCGGGATTTTGCGCCAAAAGGGGAGGGAGGGAAGGAGAGTTACGTGGAGTTGAGTGCTTCTGATGATGATAAAGACGAGGACCGAGATGAAAAAGAAGAGGAGGATGAGGAAGAAGGGGAAGTTGGTGGAGTGAGGGTGGAGAGAGAAGAGGATGAAAACGCGGGGGAGATTGTGGATGAGTTTTCTGGGTTTTCTACTTCGAATGAAGATGATTCTTCTAGCACTACCACGGGTCCTAATTCTAATAATATATCTCCCAATGGGAGAATCAAGCGTGTTATTACTGCGGGTAACTGGCAGAAGGGTGATCTTTTAGGGCGTGGCTCGTTTGGCTCTGTGTATGAAGGGATTTCTGAAGATGGATTCTTTTTTGCTGTAAAACAAGTTTCGCTACTTGATCAAGGGAATCAGGGAAGGCAAAGTGTATATCAACTCGAACAGGAAATTGCACTTTTGAGTCAATTTGAACACGAGAATATAGTTCAATACTTTGGCACTGAAATGGATGCATCAAATTTGTATATCTTTATCGAGTTTGTAACTAAAGGTTCCCTTAGAAACCTCTACCAGAGATATACTCTTAGAGATTCTCAAGTATCTGCATATACAAGGCAGATTTTGCATGGTTTAAAGTATCTCCACGATCGAAACATTGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTTAAGCTTTCAGATTTTGGATTGGCAAAGGCAATCAAATTGAATGATGTTAAATCATGCAAGGGAACAGCATTCTGGATGGCTCCAGAGGTTGTGAAAGGTAAACAAAAAGGCTATGGGCTTCCAGCCGATATATGGAGTCTGGGATGTACTGTGTTAGAGATGTTAACGGGCCAATTTCCATACTCTCACTTTGAATGTATGCAGGCATTGTTTAGAATTGGAAGAGGTGAGCCCCCTATTGTTCCAGATTCCCTATCAAGAGATGCAAAGGATTTTATCCAGCAATGTCTCAAAGTTAATCCAGATGAACGTCCCAATGCTGCTAAACTCTTAAATCATACCTTTGTCCAAAGGCCGCTACATTCCCAGTCCTCTGGGTCTGCATCTCCTTATATTTGA 1734 0.4827 MNHLPRLFGNRNKPPNMDPRKSKTRAKKQQPKLERRNAAKHFEYDAGSPSSSRGDSASASTSSSSLSSLYTRSMDLYDRTSFRIEGVEGEFDRICRRLGLSGPEDFSIPAAAWEAMKLRSSSDFPSLRNHDGMEFDEGAKEKKKIEAVESEDRARVLDECVIPADSSGCCTTGGGGGSGIKGFRPPMLKPPPGVRVLVVDETCSTWDLLRDFAPKGEGGKESYVELSASDDDKDEDRDEKEEEDEEEGEVGGVRVEREEDENAGEIVDEFSGFSTSNEDDSSSTTTGPNSNNISPNGRIKRVITAGNWQKGDLLGRGSFGSVYEGISEDGFFFAVKQVSLLDQGNQGRQSVYQLEQEIALLSQFEHENIVQYFGTEMDASNLYIFIEFVTKGSLRNLYQRYTLRDSQVSAYTRQILHGLKYLHDRNIVHRDIKCANILVDANGSVKLSDFGLAKAIKLNDVKSCKGTAFWMAPEVVKGKQKGYGLPADIWSLGCTVLEMLTGQFPYSHFECMQALFRIGRGEPPIVPDSLSRDAKDFIQQCLKVNPDERPNAAKLLNHTFVQRPLHSQSSGSASPYI* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00215 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Lapu8g00215 577 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Lapu8g00215 577 MobiDBLite consensus disorder prediction 217 298 - -
Lapu8g00215 577 Gene3D Transferase(Phosphotransferase) domain 1 305 574 - -
Lapu8g00215 577 FunFam Mitogen-activated protein kinase 1, putative, expressed 306 574 - -
Lapu8g00215 577 ProSiteProfiles Protein kinase domain profile. 308 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00215 577 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 22 573 - -
Lapu8g00215 577 Pfam Protein kinase domain 309 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00215 577 SMART serkin_6 308 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00215 577 SUPERFAMILY Protein kinase-like (PK-like) 295 565 IPR011009 -
Lapu8g00215 577 MobiDBLite consensus disorder prediction 269 298 - -
Lapu8g00215 577 MobiDBLite consensus disorder prediction 228 249 - -
Lapu8g00215 577 MobiDBLite consensus disorder prediction 49 65 - -
Lapu8g00215 577 MobiDBLite consensus disorder prediction 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00215 Lapu-Chr8 13245732 13262974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00215 180 565 MAP Kinase Kinase Kinase AT4G08500 62.274 7.30e-149 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lapu8g00215 Pkinase 3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00215 K13414 - gmx:100804388 841.647