Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00214 ATGGCGGCTTTCGTTGACAACCGTCAATTTAGCACTCACATAAACGGCGTCGTTCGCAGTTGCGGGCAGGATCTGACACCCCCTCTGCCTTTGGATTTCGACCTGGACTCCTCCAGCAGCGACGAGGATGAAAACGACGACGCTTCGTACCTGAAAGAGCTGGTACGAAAAGCAAAGGCGGAAACGGAGGCCTCGGTTATGGACCCGCGCGACGAGGGAACGGCGGATCAGTGGGTCGCACGGAACGCCTCCATGGTCCGCCTCACAGGGAAGCACCCCTTCAACGCAGAGTCCCCCCTCCCGCGCCTTATGCACCACGGCTTCATCACTCCAGTCCCACTCCACTACGTGCGCAACCACGGTCCAGTTCCCAAGGCCAACTGGGAAGACTGGACCGTCGAAATAACCGGTCTAGTCAAGCGCCCAACCCGGCTTACCATGGACCGCCTTGTGCGCGACTTCCCCCACCGCGAGTTCCCCGCCACGCTCGTCTGCGCTGGGAACCGTCGCAAGGAGCAGAACATGGTCAAGCAGACCATCGGCTTCAACTGGGGCTCCGCCGGCGCCTCCACCTCTGTGTGGTGCGGCGTGCCGCTGCGCCACGTGCTGCGCCGCTGCGGGATCCTGACACGTGGGAAGGGCGCCCTGCACGTGTGCTTCGAGGGCGCCGAGAATCTCCCCGGCGGCGGCGGATCCAAGTACGCAACGAGCATCTCGAGGGAGATGGCCATGGATCCTTCACGCGACATCATCCTGGCGTACATGCAAAACGGCGAGCCTCTGGCGCCGGATCACGGGTTCCCCGTCCGCATGATTATTCCGGGGTTTATCGGTGGGAGAATGGTTAAGTGGCTCAAACGCATTGTCGTTACTGAACATGAGTGCGATACTCATTATCATTACAAGGATAACAGAGTGCTCCCTTCCCATGTTGATCCAGAACTTGCCAGTGAAGAAGGTTGGTGGTACAAGCCAGAGTATATCATCAACGAGTTGAATATAAACTCAGTGATAACGACGCCGTGCCACGACGAGATATTGCCCATCAATTCATGGACAACGCAGAGGCCTTACGTAGTCAGAGGCTACGCATATTCTGGTGGTGGGAGGAAAGTGACACGTGTGGAGGTAACACTGGACGGTGGAGAAACATGGCACGTGTGCACACTGGACCATCCTGAGAAACCTAACAAGTATGGAAAGTACTGGTGCTGGTGCTTCTGGTCTTTGGAGGTGGAGGTGCTGGACCTGCTGGGGACCAAAGAGATTGCAGTTCGAGCTTGGGATGAAGGCCTCAACACGCAGCCAGAAAACCTAATTTGGAATCTTATGGGCATGATGAACAACTGTTGGTTTAGAGTGAAAACAAATGTATGCAAGCCCCACAAGGGTGAGATTGGCATAGTGTTTGAACACCCAACCCAACCAGGGAACCAACCTGGTGGGTGGATGGCGAAGGAAAAGCATTTGGAGAAATCACAAGAGCCGAAAGCAAGCCTTAAGAAGAGTGTGTCTACGCCATTCATGAACACTGCCTCAAAAATGTTCTCCATCTCCGAAGTCAAAAAGCATAGCAGCCCTGACTCAGCTTGGATCATTGTCCACGGCCACGTCTACGACTGCACCCGCTTCCTCAAAGATCACCCTGGTGGCACCGACAGCATCCTCATCAATGCCGGCACTGACTGCACCGAAGAGTTTGACGCCATCCACTCTGACAAAGCAAAGAAAATGCTCGAAGACTATCGAATCGGGGAGCTCATCACTACAGGTTACACCTCAGACTCATCGCCGAACAACTCCGTGCATGGCAATTCCGAATTCACCTATTTGACTCCTATCAAGGAAATCACCGTAACACCACCACTACCACCGCTACCATCACTACCACGACGCAGTGTGGCTCTCAAACCACGCGAGAAAATCCCATGCAAACTAGTGTCAAAGACCTCTATTTCCCACGACGTGAGGCTTTTCCGTTTCGCACTGCCCTCGGAGGACCAACTCCTAGGTTTACCAGTGGGTAAGCACATTTTCTTGTGCGCCACCATAGATGGCAAGCTATGCATGCGAGCCTACACTCCAACAAGTGGCGTGGACGAAGTGGGGTTCTTCGATTTGCTCATCAAAGTTTACTTCAAAGGCGTGCACCCTAAGTTCCCGAACGGAGGACTCATGTCACAGCATTTGGAGTCTCTCTCTATTGGGTCCATGTTGGACGTGAAGGGTCCACTGGGTCACATAGAGTACACTGGAAGAGGTAACTTTACGGTTCATGGGAAACCGAGATTCGCAAAGAGGTTAGCCATGCTAGCTGGTGGAACCGGGATCACACCAATTTACCAAGTGGCACAAGCGATTCTGAAAGACCCAGAGGACCTCACCGAAATGCATGTGGTGTATGCAAACCGCACAGAGGATGATATTCTGCTGAGAGAGGAGTTGGATGCATGGGCGAAGGAACATTGCGAGCGGTTCAAGGTGTGGTACGTTGTGGAAACCGCGAGGGAAGGGTGGGGATACGGTGTGGGGTTCATCACCGAAAATATCATGAGGGAGCACCTTCCAGAAGCATCAATGGATTCCTTGGCTTTGACGTGTGGACCACCACCCATGATTCAGTTCGCAGTGCAGCCTAATTTGGAGAAGATGGGGTACGATATCAAGAATGACTTGCTCGTGTTTTAG 2688 0.5376 MAAFVDNRQFSTHINGVVRSCGQDLTPPLPLDFDLDSSSSDEDENDDASYLKELVRKAKAETEASVMDPRDEGTADQWVARNASMVRLTGKHPFNAESPLPRLMHHGFITPVPLHYVRNHGPVPKANWEDWTVEITGLVKRPTRLTMDRLVRDFPHREFPATLVCAGNRRKEQNMVKQTIGFNWGSAGASTSVWCGVPLRHVLRRCGILTRGKGALHVCFEGAENLPGGGGSKYATSISREMAMDPSRDIILAYMQNGEPLAPDHGFPVRMIIPGFIGGRMVKWLKRIVVTEHECDTHYHYKDNRVLPSHVDPELASEEGWWYKPEYIINELNINSVITTPCHDEILPINSWTTQRPYVVRGYAYSGGGRKVTRVEVTLDGGETWHVCTLDHPEKPNKYGKYWCWCFWSLEVEVLDLLGTKEIAVRAWDEGLNTQPENLIWNLMGMMNNCWFRVKTNVCKPHKGEIGIVFEHPTQPGNQPGGWMAKEKHLEKSQEPKASLKKSVSTPFMNTASKMFSISEVKKHSSPDSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIHSDKAKKMLEDYRIGELITTGYTSDSSPNNSVHGNSEFTYLTPIKEITVTPPLPPLPSLPRRSVALKPREKIPCKLVSKTSISHDVRLFRFALPSEDQLLGLPVGKHIFLCATIDGKLCMRAYTPTSGVDEVGFFDLLIKVYFKGVHPKFPNGGLMSQHLESLSIGSMLDVKGPLGHIEYTGRGNFTVHGKPRFAKRLAMLAGGTGITPIYQVAQAILKDPEDLTEMHVVYANRTEDDILLREELDAWAKEHCERFKVWYVVETAREGWGYGVGFITENIMREHLPEASMDSLALTCGPPPMIQFAVQPNLEKMGYDIKNDLLVF* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00214 895 Gene3D - 509 590 IPR036400 -
Lapu8g00214 895 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 137 172 IPR022407 GO:0043546
Lapu8g00214 895 FunFam NADH-cytochrome b5 reductase 630 745 - -
Lapu8g00214 895 SUPERFAMILY Riboflavin synthase domain-like 634 751 IPR017938 -
Lapu8g00214 895 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 513 588 IPR001199 -
Lapu8g00214 895 CDD cyt_b5_reduct_like 644 895 - -
Lapu8g00214 895 Gene3D Translation factors 631 745 - -
Lapu8g00214 895 PIRSF Nitr_rd_NADH 8 894 IPR012137 GO:0006809|GO:0042128|GO:0050464
Lapu8g00214 895 Pfam Cytochrome b5-like Heme/Steroid binding domain 519 587 IPR001199 -
Lapu8g00214 895 FunFam Nitrate reductase [NADH] 746 895 - -
Lapu8g00214 895 FunFam Nitrate reductase 72 321 - -
Lapu8g00214 895 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 839 855 IPR001709 GO:0016491
Lapu8g00214 895 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 795 804 IPR001709 GO:0016491
Lapu8g00214 895 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 863 871 IPR001709 GO:0016491
Lapu8g00214 895 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 769 788 IPR001709 GO:0016491
Lapu8g00214 895 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 807 818 IPR001709 GO:0016491
Lapu8g00214 895 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 547 557 IPR001709 GO:0016491
Lapu8g00214 895 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 691 698 IPR001709 GO:0016491
Lapu8g00214 895 SMART Cyt_b5_2 516 588 IPR001199 -
Lapu8g00214 895 Gene3D - 746 890 IPR039261 -
Lapu8g00214 895 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 512 592 IPR036400 -
Lapu8g00214 895 Gene3D - 70 319 IPR036374 -
Lapu8g00214 895 Pfam Oxidoreductase FAD-binding domain 644 750 IPR008333 -
Lapu8g00214 895 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 68 329 IPR036374 -
Lapu8g00214 895 PRINTS Cytochrome B5 signature 538 548 IPR001199 -
Lapu8g00214 895 PRINTS Cytochrome B5 signature 548 562 IPR001199 -
Lapu8g00214 895 PRINTS Cytochrome B5 signature 563 570 IPR001199 -
Lapu8g00214 895 PRINTS Cytochrome B5 signature 575 587 IPR001199 -
Lapu8g00214 895 FunFam Nitrate reductase 331 507 - -
Lapu8g00214 895 FunFam Nitrate reductase 509 590 - -
Lapu8g00214 895 Gene3D - 331 506 - -
Lapu8g00214 895 PRINTS Eukaryotic molybdopterin domain signature 401 411 IPR008335 GO:0016491
Lapu8g00214 895 PRINTS Eukaryotic molybdopterin domain signature 426 438 IPR008335 GO:0016491
Lapu8g00214 895 PRINTS Eukaryotic molybdopterin domain signature 439 452 IPR008335 GO:0016491
Lapu8g00214 895 PRINTS Eukaryotic molybdopterin domain signature 329 341 IPR008335 GO:0016491
Lapu8g00214 895 PRINTS Eukaryotic molybdopterin domain signature 161 172 IPR008335 GO:0016491
Lapu8g00214 895 PRINTS Eukaryotic molybdopterin domain signature 187 202 IPR008335 GO:0016491
Lapu8g00214 895 PRINTS Eukaryotic molybdopterin domain signature 360 374 IPR008335 GO:0016491
Lapu8g00214 895 PRINTS Eukaryotic molybdopterin domain signature 278 291 IPR008335 GO:0016491
Lapu8g00214 895 PRINTS Eukaryotic molybdopterin domain signature 374 386 IPR008335 GO:0016491
Lapu8g00214 895 PRINTS Eukaryotic molybdopterin domain signature 262 275 IPR008335 GO:0016491
Lapu8g00214 895 PRINTS Eukaryotic molybdopterin domain signature 86 100 IPR008335 GO:0016491
Lapu8g00214 895 PRINTS Eukaryotic molybdopterin domain signature 108 124 IPR008335 GO:0016491
Lapu8g00214 895 PRINTS Eukaryotic molybdopterin domain signature 245 261 IPR008335 GO:0016491
Lapu8g00214 895 PRINTS Eukaryotic molybdopterin domain signature 172 184 IPR008335 GO:0016491
Lapu8g00214 895 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 739 889 IPR039261 -
Lapu8g00214 895 Pfam Oxidoreductase molybdopterin binding domain 120 299 IPR000572 -
Lapu8g00214 895 PANTHER SULFITE REDUCTASE 58 461 - -
Lapu8g00214 895 CDD eukary_NR_Moco 71 456 - -
Lapu8g00214 895 Pfam Mo-co oxidoreductase dimerisation domain 327 458 IPR005066 GO:0016491|GO:0030151
Lapu8g00214 895 Pfam Oxidoreductase NAD-binding domain 770 877 IPR001433 GO:0016491
Lapu8g00214 895 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 544 551 IPR018506 GO:0020037
Lapu8g00214 895 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 639 751 IPR017927 GO:0016491
Lapu8g00214 895 PRINTS Cytochrome B5 reductase signature 863 871 - -
Lapu8g00214 895 PRINTS Cytochrome B5 reductase signature 670 681 - -
Lapu8g00214 895 PRINTS Cytochrome B5 reductase signature 691 698 - -
Lapu8g00214 895 PRINTS Cytochrome B5 reductase signature 736 750 - -
Lapu8g00214 895 PRINTS Cytochrome B5 reductase signature 807 818 - -
Lapu8g00214 895 PRINTS Cytochrome B5 reductase signature 769 788 - -
Lapu8g00214 895 SUPERFAMILY E set domains 331 458 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00214 Lapu-Chr8 13163820 13170431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00214 626 886 NADPH P450 reductases AT5G17770 42.205 1.20e-55 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00214 K10534 - gmx:100813471 1657.11