Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00209 ATGGCCAGCGCTCCCTCTCCACGCGAAGAGTTCGTGTACATGGCCAAGCTCGCCGAGCAAGCCGAGCGCTACGAAGAGATGGTCGAGTTCATGGAGAAGGTCTCTGCTGCCGCAGAGAACGAGGAACTCACCGTCGAGGAGCGTAACCTCCTCTCCGTCGCCTATAAGAACGTCATCGGCGCCAGACGCGCCTCCTGGCGCATCATCTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGCAACGAGGACCACGTCGCCGTCATCCGCGACTACCGATCCAAGATCGAGACCGAACTCTCCAACATCTGCGACGGGATACTCAAGCTCCTCGACTCGCGCCTCGTTCCCTCAGCCGCCTCCGGCGACTCCAAGGTCTTTTACCTCAAAATGAAGGGCGACTACCACAGGTACCTCGCCGAGTTCAAGACCGGTGCTGACCGCAAAGAGGCCGCCGAGAGCACGCTCTCCGCCTACAAATCTGCTCAGGACATTGCAAACTCTGAGCTGCCTCCAACTCACCCTATTAGGCTGGGTCTTGCTCTGAACTTCTCTGTGTTTTACTATGAGATTCTTAACTCTCCTGATCGGGCTTGCAGCCTTGCAAAACAGGCTTTTGATGAGGCAATTGCTGAATTGGATACATTGGGAGAGGAGTCATACAAGGATAGCACATTGATCATGCAACTTCTTCGTGATAACCTCACCCTCTGGACCTCTGACATGCAGATGAAATTAAAGAAGCCGCACCTAAAGGTGACGGAGAACAAAATTAAACACATCATACTGCTAATTAGTCATTGA 801 0.5381 MASAPSPREEFVYMAKLAEQAERYEEMVEFMEKVSAAAENEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIETELSNICDGILKLLDSRLVPSAASGDSKVFYLKMKGDYHRYLAEFKTGADRKEAAESTLSAYKSAQDIANSELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQMKLKKPHLKVTENKIKHIILLISH* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00209 266 Coils Coil 14 41 - -
Lapu8g00209 266 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Lapu8g00209 266 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Lapu8g00209 266 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Lapu8g00209 266 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Lapu8g00209 266 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Lapu8g00209 266 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Lapu8g00209 266 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Lapu8g00209 266 PANTHER 14-3-3 PROTEIN 8 241 IPR000308 -
Lapu8g00209 266 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Lapu8g00209 266 Pfam 14-3-3 protein 14 238 IPR023410 -
Lapu8g00209 266 SMART 1433_4 8 251 IPR023410 -
Lapu8g00209 266 Gene3D - 2 250 IPR036815 -
Lapu8g00209 266 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Lapu8g00209 266 FunFam 14-3-3 protein epsilon 4 250 - -
Lapu8g00209 266 PIRSF 14-3-3 2 249 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00209 Lapu-Chr8 12985277 12988877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00209 6 242 14-3-3 family AT1G78300 91.561 1.79e-163 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00209 K06630 - gmx:100794129 462.225