Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00198 ATGGCAAAGTCTACTCTACTGTGTCTCCATGGTTATGGCATATTGATCACACTAATGTTACTCCTAAAGCTCATTCCTATCGAAGGTAGCACCGATCATAACGAGTGCCGGGAATTGTCTTGTGGACCATACCAACCACCTATTAGATTTCCCTTCCAACTCGTCAAGGGGATTCATGAATGTGCTCATCCTGGGTATTGTCTCTATTGCACTCAAGAACACAGCACCATGCTTGTCCTCCCTACCATAAAACTCTACGTTACACACATAGACTACCAAAATCGGCAAATTCACTTGAAAGACCCGAATAATTGCCTTCCAAAAACGTTTATAAACCACAACAATTCTTTCAATTATTACTACTTTACCGTATCAAGCAGCTTGAGCTTCTTTGACTGTTCTTCAGTTGGGTATAGACAACTCAGAAATAAATATGGATACTTCCAAGATATGATCTCCTGTCCGATTTACGTTACTGATCCTCAGGCAAGCGTCTTGGAATGGGACCTGACATTCTGTTCTAAGATGTTCGACGTCACTGCACCTGTCTCGGCTTACGAGATGCTGCAGAATCAGTTTATGTTGACATGGTCCAAACCAGCTTGTTCAATTCTTTTGGGCCTGCTGGTCATTGTTGCTTTTAAGATTTTCCGCTATTTTAGAGAGAAGGAAGAAGACCAAACAAGAGTGGACAAATTCTTAGAGGATTACAGGGCAGAAAAGCCTACAAGATTTACTTACGCCGATATCAAGAGAATCACCGGTGGTTTCAAAGAAAAACTAGGGGAAGGAGCTCATGGAGCTGTTTTCAGAGGCAAACTTTCAAATGAGATTCTCGTGGCAGTGAAGATCATAAATAATACAGACGGAGATGGGAACGAGTTCATCAATGAAGTGGGAATTATGGGAAAAATCCACCACATCAACGTGGTTCGTTTGCTAGGCTTCTGCGCCGAAGGAATCCATCGTGCTCTTGTCTACAATTTGTTTCCAAAGGGTTCACTACAAAGCTTCATATTTCCACCTGATGACAAGGACCATTTCCTTGGCTGGGAGAAGATGCATCACATTGCTCTTGGTATAGCCAAAGGGATTGAGTATCTTCATCAAGGTTGTAATCATCCCATTATTCACTTTGACATCAATCCTCACAATGTGTTACTTGATGACAACTTCACTCCAAAGATTTCTGATTTTGGCTTAGCCAAATTGTGTTCCAAGAATCCAAGTTTGGTGTCCATGACAGCTGCTAGGGGAACCTTGGGATACATTGCACCCGAAGTTTTCTCCAGGAACTTCGGAAATGTGTCCTATAAGTCTGACATTTACAGTTATGGAATGTTGTTGCTAGAAATGGTTGGAGGAAGGAAGAATGTAGACATGTCATCCACACAAAATTGCCGTGTTCTGTACCCGGATTGGATCCACAACCTGGTTGATGGAGATATACATATCCATGTTGAGAATGAAGGTCAAGTTAAAATTGCGAAGAAACTAGCCATTGTTGGACTTTGGTGCATTCAGTGGCAGCCAGTGAACCGTCCATCCATAAAATCTGTCATACAAATGCTAGAAACTAAAGAGGAAGAGCAGTTAACTGTACCTCCCAATCCATTTCACTCAACCACTTCCACTACATGTAGTGGTCTCGTTTCAGCAAGAAGACCTATGGAGCTGGAATCAATTCAGGAGTGA 1695 0.4212 MAKSTLLCLHGYGILITLMLLLKLIPIEGSTDHNECRELSCGPYQPPIRFPFQLVKGIHECAHPGYCLYCTQEHSTMLVLPTIKLYVTHIDYQNRQIHLKDPNNCLPKTFINHNNSFNYYYFTVSSSLSFFDCSSVGYRQLRNKYGYFQDMISCPIYVTDPQASVLEWDLTFCSKMFDVTAPVSAYEMLQNQFMLTWSKPACSILLGLLVIVAFKIFRYFREKEEDQTRVDKFLEDYRAEKPTRFTYADIKRITGGFKEKLGEGAHGAVFRGKLSNEILVAVKIINNTDGDGNEFINEVGIMGKIHHINVVRLLGFCAEGIHRALVYNLFPKGSLQSFIFPPDDKDHFLGWEKMHHIALGIAKGIEYLHQGCNHPIIHFDINPHNVLLDDNFTPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSTQNCRVLYPDWIHNLVDGDIHIHVENEGQVKIAKKLAIVGLWCIQWQPVNRPSIKSVIQMLETKEEEQLTVPPNPFHSTTSTTCSGLVSARRPMELESIQE* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00198 564 Gene3D Transferase(Phosphotransferase) domain 1 330 537 - -
Lapu8g00198 564 PANTHER RUST RESISTANCE KINASE LR10-RELATED 227 543 IPR045874 GO:0004672
Lapu8g00198 564 SUPERFAMILY Protein kinase-like (PK-like) 236 526 IPR011009 -
Lapu8g00198 564 Pfam Wall-associated receptor kinase galacturonan-binding 36 101 IPR025287 GO:0030247
Lapu8g00198 564 FunFam PR5-like receptor kinase 330 536 - -
Lapu8g00198 564 ProSiteProfiles Protein kinase domain profile. 255 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00198 564 Pfam Protein kinase domain 258 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00198 564 FunFam S-receptor-like serine/threonine-protein kinase 222 329 - -
Lapu8g00198 564 ProSitePatterns Protein kinases ATP-binding region signature. 261 283 IPR017441 GO:0005524
Lapu8g00198 564 Gene3D Phosphorylase Kinase; domain 1 228 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00198 Lapu-Chr8 12568612 12570539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00198 167 539 Receptor kinase-like Gene Family AT4G18250 39.948 1.26e-92 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lapu8g00198 Pkinase 7.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00198 - - gmx:100813531 814.298