Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00157 ATGGGCTACCTCAATTGCAACGCCGAGACAGCAATAGCCATATGCCACCCTCACTCCCTCAAGAACAACAAAAACCCCAAAACCCCAACACAGGCCCACACCGTCCGACACTTCGCCTACTCCGACATCCTCGCCGCCACCAACGCCTTCTCCGCCGACACCTTCTTAGGCAAAGGCAGCCACGGGAGCGTCTACAAAGCCACCCTCTACGACGGCGCACTCATCGCAGCCGTAAAAAAAACCAAACCCTCCCAAGAGATCGAAATCCTGTCCCACGTTCAAAGCCGGCGCTTGGTCAACCTAATTGGCTTCTGCAACGACCAAACTAACAACAACAACAACAAACTCTTTGTTGTGGAGTACATGCCCAACGGTTCACTCCACGACCTTCTCCACTCCACCAAAACGGTTGGGCCCCCCGGTTGGACCGTGCGTGTCCGGTTCGCGGTTCAGGTTGCGAAAGCGGTTCGTTTCTTGCACTCGTCCGAACCGCCCGTTATTCACCGTGACATTAAATCGTCCAATGTGTTAATCGACGAGAAGTGGAACGCGCGACTCGGTGACTTCGGACTCGCGTTTAGAGGACACGTGGCGGATTCTCGCGTGCCGCCAGCGGGGACGTTAGGGTACCTCGACCCGTGCTATCTTGCGCCGGGTGACTTGAGTCCCAAGAGCGATGTCTTCAGTTTTGGAATCTTGCTGCTGGAGATAGCGAGTGGGAGGCAAGCGATTGACGTGAGGCACAGTCCGCCGTCGGTGTTGGATTGGGCGATACCGTTGGTCCGCCGTGGCGAGTTTCGGGAGATTTGCGACCCGCGTATAGGGCCGCCGCCGGACATGGCGGCGTTCCGGCGGATGGTGGTACTGGCGGCGAGGTGCGTGAGGTCAACGGCGGAGAGACGGCCGACGATGGCGGAGGTGGTGGAGTGTCTGACAGCGGTGAGGAAGAATTTTGACACGGCGGTGATGTGGATGAAAATGAAACGGCGCGTGGTGAAGGCGCGTGGCAATCCGTTCCCTGATCGGGACAGGAGTGAGGAATCTGTGAGAATGGTGAAAGGTGCGAATAGAAACTGTAGAAGGAATGGGAAGGTATCTAGTGTGTTAGGTGTAGAGTATGAGAATGGACCCGCGAATCACGCGGTTAGATCTAGGTCCCTTGGTTCTAGTTTTTTCGGGGAAATGAACGTTAAGTCGGTTTTGGAACGGTACCCTAACAAATTTGGGTTGGGGTATAGGGAGGTAAGACTAAAGAGATCGTGGTCAGTGGGGCTTTTGGAACATTATGGTAAGGAATCGAACGAGTGGCATAACGATACTCATGAGAATGATTATGATACAGTGAGTTGTTCCACAGATATCAACTTTCCAAGTTGA 1377 0.5439 MGYLNCNAETAIAICHPHSLKNNKNPKTPTQAHTVRHFAYSDILAATNAFSADTFLGKGSHGSVYKATLYDGALIAAVKKTKPSQEIEILSHVQSRRLVNLIGFCNDQTNNNNNKLFVVEYMPNGSLHDLLHSTKTVGPPGWTVRVRFAVQVAKAVRFLHSSEPPVIHRDIKSSNVLIDEKWNARLGDFGLAFRGHVADSRVPPAGTLGYLDPCYLAPGDLSPKSDVFSFGILLLEIASGRQAIDVRHSPPSVLDWAIPLVRRGEFREICDPRIGPPPDMAAFRRMVVLAARCVRSTAERRPTMAEVVECLTAVRKNFDTAVMWMKMKRRVVKARGNPFPDRDRSEESVRMVKGANRNCRRNGKVSSVLGVEYENGPANHAVRSRSLGSSFFGEMNVKSVLERYPNKFGLGYREVRLKRSWSVGLLEHYGKESNEWHNDTHENDYDTVSCSTDINFPS* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00157 458 PANTHER OS01G0253100 PROTEIN 26 314 - -
Lapu8g00157 458 SUPERFAMILY Protein kinase-like (PK-like) 25 311 IPR011009 -
Lapu8g00157 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Lapu8g00157 458 Gene3D Transferase(Phosphotransferase) domain 1 122 358 - -
Lapu8g00157 458 Pfam Protein kinase domain 53 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00157 458 ProSiteProfiles Protein kinase domain profile. 50 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00157 458 Gene3D Phosphorylase Kinase; domain 1 11 121 - -
Lapu8g00157 458 SMART serkin_6 50 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00157 458 ProSitePatterns Protein kinases ATP-binding region signature. 56 80 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00157 Lapu-Chr8 11090710 11092467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00157 36 311 Receptor kinase-like Gene Family AT3G59420 41.297 8.65e-65 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lapu8g00157 Pkinase 2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00157 - - vun:114194010 767.689