Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00154 ATGGCACCCAGTTTTGATTGTTTTTCGAGCCTTCTCTGTGCGGAAGACAACATTATTTTTGACGAAAATGATCGGGGAGTTTTGGTGGAGGAGTTGGAGGACACGTGGCAGCATCCTATATATGATCAAAATCATAGTCAAATTGAGAACTTGGATGTCTTGGATGTACAGTATGTGTCCTTTCCATTGCCCAGTGATGAGTGTTTGAGACTAATGATGGAAAAAGAATTGCATCACTTGCCTAATAGTGATTATGTGAATAAACTGAGGAGTGGGGATTTGGACATTGGGGCCAGAAAAGAGGCCATTGATTGGATTGAGAAGGTCCAAGAGCACTTCGGTTTTGGACCTCTCTGTGCATATCTATCTATAAATTACTTGGACCGCTTCCTCTCTGTTTATGAATTGCCAAAGCAAAGAGCTTGGACTATGAAATTGTTGGCTGTAGGTTGCCTATCTCTGGCAGCCAAAATGGAAGAGACTGATGTTCCTACATCTCTTGATTTGCAGGTGGGTGAATCTAAATATATATTTGAAGCCAAAACAATACAGAGAATGGAGCTTCTTGTTCTGAACACATTGAAGTGGAGAATGCAGGCAATTACCCCATTTTCCTTCATTGACTATTTCCTTCAGAAGATCAATGATGATGAAGCAGCAATTGAAGCTTCAATTTTGCGATCCTCCGAGCTTATACTGAGTACTGTAAGAGGAATTGACTTCATAGAGTTCAGACCCTCAGAGATTGCAGCAGCAGTGGCAATATCTGTGGTGGGGGATGACCAAACAGTTCACACAGAGAAAGCAAATTCTGATCTGATTCAGCCTGTAGAAAAGGAGAGGGTCTTGAAGTGTGTTAAAATGATCCAAGAGCTGTCATCAAACAGTGGTTCTGCTAAGGATGCCATTCCTTCTGTTTCTGTCCCTAGCGTGCCCGAAAGCCCAATAGGGGTGTTGAACAATGCATGCTTCAGCTACAAAAGTGATGACCCAAATGCTGCTCCTTGTGCAAATTCTTCACATAATGATAGTCCAGATGCTAAAAGGAGGAAGCTAGACAAAACCTTTGGAGAATAG 1077 0.4215 MAPSFDCFSSLLCAEDNIIFDENDRGVLVEELEDTWQHPIYDQNHSQIENLDVLDVQYVSFPLPSDECLRLMMEKELHHLPNSDYVNKLRSGDLDIGARKEAIDWIEKVQEHFGFGPLCAYLSINYLDRFLSVYELPKQRAWTMKLLAVGCLSLAAKMEETDVPTSLDLQVGESKYIFEAKTIQRMELLVLNTLKWRMQAITPFSFIDYFLQKINDDEAAIEASILRSSELILSTVRGIDFIEFRPSEIAAAVAISVVGDDQTVHTEKANSDLIQPVEKERVLKCVKMIQELSSNSGSAKDAIPSVSVPSVPESPIGVLNNACFSYKSDDPNAAPCANSSHNDSPDAKRRKLDKTFGE* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00154 358 SMART cyclin_7 104 192 IPR013763 -
Lapu8g00154 358 SUPERFAMILY Cyclin-like 183 291 IPR036915 -
Lapu8g00154 358 SUPERFAMILY Cyclin-like 61 198 IPR036915 -
Lapu8g00154 358 MobiDBLite consensus disorder prediction 333 358 - -
Lapu8g00154 358 Pfam Cyclin, C-terminal domain 201 301 IPR004367 -
Lapu8g00154 358 CDD CYCLIN_AtCycD-like_rpt2 201 289 - -
Lapu8g00154 358 CDD CYCLIN_AtCycD-like_rpt1 98 196 - -
Lapu8g00154 358 Gene3D - 70 288 - -
Lapu8g00154 358 Gene3D - 82 199 - -
Lapu8g00154 358 FunFam D6-type cyclin 195 287 - -
Lapu8g00154 358 MobiDBLite consensus disorder prediction 343 358 - -
Lapu8g00154 358 PANTHER CYCLINS 67 294 IPR039361 -
Lapu8g00154 358 FunFam D2/4-type cyclin 82 194 - -
Lapu8g00154 358 ProSitePatterns Cyclins signature. 99 130 IPR006671 -
Lapu8g00154 358 SMART Cyclin_C_2 201 316 IPR004367 -
Lapu8g00154 358 Pfam Cyclin, N-terminal domain 69 198 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00154 Lapu-Chr8 11007591 11010513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00154 69 337 Core Cell Cycle Gene Families AT2G22490 49.455 6.62e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00154 K18810 - gmx:100803873 548.125