Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00153 ATGATGTGGGAATGGGACGATTACGAAGACGCCATCCCCAAATCCGACCAACCCCAACACCAACACGATTCTCATCTCAACTTCGATTTCTTCTCCGCCCTCTCCAAACCCAAGGATTATTATAAGATACTGGAAGTGGATTATGATGCTACGGATGATGATATTCGCTCCAATTACATTCGTCTCGCTCTGAAGTGGCACCCGGACAAGCAGAAAGAGCAGGATTCTGCTACCTCGCGATTCCAAGACATAAACGAGGCCTACCAGGTTTTGAGTGATCCAGTCAAAAGGAGGGAATATGACATAAACGGGATGCGTTATGAATATGATTACAACATCATTGATTATCTTAATCGTTACAAGGGTCTTATCTTGACGTGCAATGGCCTTGGCATAAAGCATTCCATATGGTAA 414 0.442 MMWEWDDYEDAIPKSDQPQHQHDSHLNFDFFSALSKPKDYYKILEVDYDATDDDIRSNYIRLALKWHPDKQKEQDSATSRFQDINEAYQVLSDPVKRREYDINGMRYEYDYNIIDYLNRYKGLILTCNGLGIKHSIW* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00153 137 Gene3D DnaJ domain 31 116 IPR036869 -
Lapu8g00153 137 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 137 - -
Lapu8g00153 137 ProSiteProfiles dnaJ domain profile. 39 104 IPR001623 -
Lapu8g00153 137 FunFam Chaperone protein DNAj, putative 31 118 - -
Lapu8g00153 137 SMART dnaj_3 38 96 IPR001623 -
Lapu8g00153 137 PRINTS DnaJ domain signature 59 74 IPR001623 -
Lapu8g00153 137 PRINTS DnaJ domain signature 76 96 IPR001623 -
Lapu8g00153 137 PRINTS DnaJ domain signature 41 59 IPR001623 -
Lapu8g00153 137 ProSitePatterns Nt-dnaJ domain signature. 81 100 IPR018253 -
Lapu8g00153 137 SUPERFAMILY Chaperone J-domain 35 123 IPR036869 -
Lapu8g00153 137 CDD DnaJ 39 93 IPR001623 -
Lapu8g00153 137 Pfam DnaJ domain 39 101 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00153 Lapu-Chr8 10964335 10968587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00153 32 101 C2H2 Transcription Factor Family AT1G74250 41.333 2.92e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00153 - - var:108338470 269.626