Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00145 ATGAGCGAAGAAGAGAGCAAGGGTTCTGCTTTTCTGGGAACCAACTCCGCTTATTCAGGTTTTCTTCTTGACCCTGCAAAATGGGGTATGCTGAGTTTGCCGGAGAAACAAAGACTAGTTCATGAGATTGCTCGACAGTCAAAAGATGCTTCTAGTATGCTTCAGACATTTACACGCAGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGATATACCAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCCAAGAACTCCAACTTGCAGGTCAACGTAAATATGCCTGCTCATTCTCCTACCAAAATTTGCATTGGATCTAAAAGGAAAAAGAAACCTGCATCTGAGGATTTTCATCATGCTCCTCCGGAGAACATTAAAGAGGAAATAGTGAAAACCTTTTTGTGTCAAAATGTTGCGTGCAAAGCTACAGTGAATCCTGAAGATTCTTTTTGCAAGAGATGTTCTTGTTGCATATGCCATTGCTATGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGTAGCTCCGATCTTCCCAATGAGGAGTCATGTGGAATGTCGTGTCATTTGCAATGTGCTTTGAGTAATCAAATGTCTGGCATTTTGAAGGGCAGTTGTGGTATTAAGTTAGATGGAGCCTTCTCTTGTGTTTCTTGTGGAAAAAATAATGAACTGATGAAGACATGGCGAAAGCAATTATTGGTTGCCAAAGAAGCAAGAAGAATGGATATACTGTCGCTGCGAATATCCCTTGCTCACAGAATTCTTGTAGGAACAGAAATGTACAAGGAACTGCAGAAGATTGTAGAAACTGCTCTCAAATTACTGGAGAATGAAGTGGGATCACTTGATCATGTATATGCGAGGATGACACGGGGAATTGTAAGCAGGCTTTCATGTGGTGCTGAGGTTCAGAGATTGTGCTCTGCTGCAATTGAATGTTTTGATTCAAAGTTTTCTGACCTTTTCTCTGTTTGTGTGGAAAAGAAAGATGCACCAACATGTTCAATTCGTTTTGAAGAGTGTCTTCCTACTTCAGTGGTCATCGTGCTAGAGTACAATGACAAACTTTTAAAGAACTTTCTAGGCTGCAGGCTTTGGCACCGAGTATCAACAACAGACTACCCTGAACAACCCACCTTCATTGTCTTGAGGCCTGAGAAAAGATTCAAGTTAGAAAACCTCCATCCTTCAACTGAGTACTTTTGCAAGGCTTCTCTGTTCAGCAGCACAGGGATTTTGGGTGCTGCAGAAGCTAAATGGGTGACCCATTGTGAGCCCACCAATTCTGCAAAAGGTATAAGTTTTGGTGGAAATCGTTTTAGATGGTCCCCGCAGAGATCCTCAGGTACAGGAGTGGAAATGTGTGCACAGGACCGAAGAAGTGCTGAAACTCGTCCCTCAGAGTCTGCCAACTCTGACATGAAGTTATCATCTCGACAGCATCCTGGGAAACCCATCATTTTGAACATCAGGGGTAGGTTTGAAGAGTTCCTCTCCAAGCCTCAGTCACTAGAGCCTTTTTCATATAAAAATCTTGCTGCAGTTTCACCATCCACACCTTCTAAATCATATGAAATGAGGCAAATTCCTGGTTTGAATTCTAGAAAGCGGTCAAAGGAAAATGACTACGAGTATTCTGTGAGGGTGGTGAAATGGTTGGAGCATCTAGGCCACATAGACGAAATCTTCAGAGTGAGATTTCTGACCTGGTTCAGCCTTAAGGCTACTCAGCAGGAGAGAAGGGTGGTTAGTGCGTTCGTTGATGCATTGATTGATGATCCAGCAAGCTTAGCAGACCAGCTCATACACACTTTCAGTGATGAAATATGTTGCGAGCAAAAGCCTTTGTGA 1884 0.4236 MSEEESKGSAFLGTNSAYSGFLLDPAKWGMLSLPEKQRLVHEIARQSKDASSMLQTFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKNSNLQVNVNMPAHSPTKICIGSKRKKKPASEDFHHAPPENIKEEIVKTFLCQNVACKATVNPEDSFCKRCSCCICHCYDDNKDPSLWLTCSSDLPNEESCGMSCHLQCALSNQMSGILKGSCGIKLDGAFSCVSCGKNNELMKTWRKQLLVAKEARRMDILSLRISLAHRILVGTEMYKELQKIVETALKLLENEVGSLDHVYARMTRGIVSRLSCGAEVQRLCSAAIECFDSKFSDLFSVCVEKKDAPTCSIRFEECLPTSVVIVLEYNDKLLKNFLGCRLWHRVSTTDYPEQPTFIVLRPEKRFKLENLHPSTEYFCKASLFSSTGILGAAEAKWVTHCEPTNSAKGISFGGNRFRWSPQRSSGTGVEMCAQDRRSAETRPSESANSDMKLSSRQHPGKPIILNIRGRFEEFLSKPQSLEPFSYKNLAAVSPSTPSKSYEMRQIPGLNSRKRSKENDYEYSVRVVKWLEHLGHIDEIFRVRFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFSDEICCEQKPL* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00145 627 PANTHER VIN3-LIKE PROTEIN 2-RELATED 21 462 IPR044514 GO:0010048|GO:0040029
Lapu8g00145 627 CDD PHD_VIN3_plant 165 229 - -
Lapu8g00145 627 Pfam PHD - plant homeodomain finger protein 145 264 IPR032881 -
Lapu8g00145 627 MobiDBLite consensus disorder prediction 456 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00145 Lapu-Chr8 10503417 10508176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00145 23 620 PHD Gene Family AT5G57380 34.202 3.20e-103 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00145 - - gmx:100785502 1135.94