Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00121 ATGGATTCCCGCGACTCTTCCCCTCGCTCCCGTGACCCCGACGCCGACAACCACCATCACCACCACTCCTTCGACGACCCCCCGACCTCCCTCCACTCCAAGGTCAAGCTCATGTGCAGCTACGGCGGCCGAATCCAGCCCCGCCCCCACGACAACCATCTCTCCTACGTCGCCGGCGACACCAAGATCCTCACCGTCGACCGCCACATCAAGCTCCCCGCCCTCCTCACCAAACTCTCCTCCCTCGCCAACGTCCCCGCCAACGCCACCTTTTTCAAGTACCAGCTCCCTGGCGAGGACCTCGACGCTCTCATCTCCGTCACCAACGACGAAGACCTCCACCACATGATGGTCGAGTACGATCGCCTCTCCCGCACCTCGCCTAGACCCGCACGAATCCGCCTCTTTCTGTTCCCGCTCCACAGTAATAACACCAACATCAATTTCGCACTCACCGATTCCAAACCCGAGCGCCAGTGGTTCGTCGACGCTCTCAACTCCGTTCAGGTTCCGGTTCTCGAAGGTTCTTCGCCGCCGCCAACGCAAGCGCCAAATCCAGATTTTCTCTTCGGATTGGATAAGCCAGCGGCGGCAGCTCCCGATGCTCCGCCGAAGAATCCTACGCCGGAATCGGAATGCTTCTCCGAGGATCGTCCAGCGGTCAGAGATGCCGAAACCGAAACCGAACGCGTGCCGGAACCTGAAATTCGGAGGTTGCAGATTGGGAACAACAATGAGCACCAATTGCAACGAAAGATGAAAATGGAGGAAGATAATAACGGTAGGGCTTACGGCGTTAGCGGCGCGGAAGCTTTCGCTCAGAAGAACACGGAGAATGTGACGCCGTTAGTTGCGCACGGGCAAATGCAGGCGCAAGGTTTTCATTCTGGAACGGTGTCGTTTTTGCAGGAGAGGAATAACGCGGGTTATTCGTTGGCTGTTCCTACGACCGGGAGTGAGATTTATCTCATTCAGACTCCTTCTGGAATTTTCCAAGCGGTTCGGCCGGTGACTGGACCAGTGGGGCAACCGGTTTATCTGGTTCCGGCGCCTGGTTCGGTTGGTGCGGCGGCGGAGCGTGGATATTCTGCGGGACACGGCGGAGGGAGGTGGTGA 1116 0.5842 MDSRDSSPRSRDPDADNHHHHHSFDDPPTSLHSKVKLMCSYGGRIQPRPHDNHLSYVAGDTKILTVDRHIKLPALLTKLSSLANVPANATFFKYQLPGEDLDALISVTNDEDLHHMMVEYDRLSRTSPRPARIRLFLFPLHSNNTNINFALTDSKPERQWFVDALNSVQVPVLEGSSPPPTQAPNPDFLFGLDKPAAAAPDAPPKNPTPESECFSEDRPAVRDAETETERVPEPEIRRLQIGNNNEHQLQRKMKMEEDNNGRAYGVSGAEAFAQKNTENVTPLVAHGQMQAQGFHSGTVSFLQERNNAGYSLAVPTTGSEIYLIQTPSGIFQAVRPVTGPVGQPVYLVPAPGSVGAAAERGYSAGHGGGRW* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00121 371 MobiDBLite consensus disorder prediction 211 234 - -
Lapu8g00121 371 MobiDBLite consensus disorder prediction 1 31 - -
Lapu8g00121 371 SUPERFAMILY CAD & PB1 domains 50 144 - -
Lapu8g00121 371 PANTHER OS05G0427100 PROTEIN-RELATED 2 273 - -
Lapu8g00121 371 MobiDBLite consensus disorder prediction 1 29 - -
Lapu8g00121 371 MobiDBLite consensus disorder prediction 174 234 - -
Lapu8g00121 371 Gene3D - 55 139 - -
Lapu8g00121 371 CDD PB1_UP2 38 138 - -
Lapu8g00121 371 SMART PB1_new 49 140 IPR000270 GO:0005515
Lapu8g00121 371 Pfam PB1 domain 51 139 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00121 Lapu-Chr8 10142642 10144015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00121 35 168 MAP Kinase Kinase Kinase AT1G04700 42.759 7.47e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00121 - - vra:106764239 644.425