Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00111 ATGCCGAATCCCGAGGCTAACCGCAGCCAACACTCCCGCTCCCGGGCCCGTCCCTCCACGTCAGCAGCGCCACGGCCCACGGCCCGCGCACGCGTCTCGCTGCGGCAGCTGCTGCGCGTGGCGTCAGTGGCGAGCGGTATTCAGTTCGGTTGGGCCTTGCAGCTCTCCCTCCTCACTCCCTACGTCCAGCAGCTCGGCATCCCTCACCAATGGGCCAGCATCATCTGGCTCTGTGGCCCTGTCTCCGGCCTCTTCGTCCAGCCTCTCGTCGGCCACATGAGCGACCGCTGCGCTAGCCGCTTTGGCCGCCGCCGCCCCTTCATCTTCGTCGGCGCCGTCGCTATCGTCATCGCCGTTATCATCATCGGCTACGCCGCTGACATCGGCTGGCTCTTCGGCGACACCGCCACCTACCGACCAGCCGCCATAACTGTCTTCATAATCGGCTTTTGGATCCTCGACGTCGCCAACAACGTGACGCAAGGTCCCTGTCGAGCCTTGCTCGGTGATCTCACCAGCAAGGATCCTCGAAGGACACGGGTTGCAAATGCTTATTACTCATTGTTTATGGCCGTTGGTAATATTCTTGGCTATGCAACTGGATCATACAGTGGTTGGTACAAGATTTTTACTTTTACACTTTCCCCTGCTTGCACAATAAGTTGTGCAAATCTGAAGTCTGCTTTCTTTCTTGACATTGCTTTCATTGTGGTCACAACGTATATAAGCATCATGGCAGCTCATGAAGTACCTTTAAATTCCAATGAGGTAGCCCATGCTGAAGTAGGGGCCGAGGAGTCAGGTAGTGCCGAAGAAGCTTTCATGTGGGAATTATTTGGGACATTCAAATATTTTTCAACCCCTGTATGGATAATTCTGTCTGTTACTGCTCTCACATGGATTGGGTGGTTTCCATTTACTCTCTTTGATACTGATTGGATGGGTCGAGAGATTTATGGTGGTGATCCAAATCAAGGCCTTATTTATGATACTGGAGTTAGAATGGGAGCACTTGGTTTGTTGCTTAATTCAGTTGTTCTTGCATTAACATCATTGTTCATGGAAAGGTTATGCAGGAAGAGGGGGGCTGGTTTTGTGTGGGGAATCTCAAATATCCTGATGACATTTTGCTTTCTTGCAATGCTAGTATTAACCTATGTGGCAAGTAACATAGGCTATGCAGGCAAAGATCTCCCTCCACCAGGCATTGTGATAGCTTCGTTGATTATATTTACCATTCTTGGGTTTCCACTGGCAATCACTTACAGTGTTCCGTATGCCTTAATTTCCACACATATTGAGTCTTTGGGACTTGGCCAAGGTTTATCAATGGGTGTCCTAAATTTGGCAATAGTGGTCCCACAGATAATAGTGTCACTGGGAAGTGGACCATGGGATCAGCTATTTGGTGGAGGAAACTCCCCAGCCTTTGCTGTGGGAGCTGTTTCAACCATTATCAGTGGACTCATAGCTATCTTGGCTATTCCTCGATCTGGTGCTCAAAAGGGTCGAAGCCATGCGTGA 1524 0.5046 MPNPEANRSQHSRSRARPSTSAAPRPTARARVSLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGHMSDRCASRFGRRRPFIFVGAVAIVIAVIIIGYAADIGWLFGDTATYRPAAITVFIIGFWILDVANNVTQGPCRALLGDLTSKDPRRTRVANAYYSLFMAVGNILGYATGSYSGWYKIFTFTLSPACTISCANLKSAFFLDIAFIVVTTYISIMAAHEVPLNSNEVAHAEVGAEESGSAEEAFMWELFGTFKYFSTPVWIILSVTALTWIGWFPFTLFDTDWMGREIYGGDPNQGLIYDTGVRMGALGLLLNSVVLALTSLFMERLCRKRGAGFVWGISNILMTFCFLAMLVLTYVASNIGYAGKDLPPPGIVIASLIIFTILGFPLAITYSVPYALISTHIESLGLGQGLSMGVLNLAIVVPQIIVSLGSGPWDQLFGGGNSPAFAVGAVSTIISGLIAILAIPRSGAQKGRSHA* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00111 507 MobiDBLite consensus disorder prediction 1 21 - -
Lapu8g00111 507 FunFam Sucrose transport protein 31 495 - -
Lapu8g00111 507 SUPERFAMILY MFS general substrate transporter 35 498 IPR036259 -
Lapu8g00111 507 PANTHER SUGAR TRANSPORTER 31 493 - -
Lapu8g00111 507 NCBIfam sucrose/proton symporter 32 498 IPR005989 GO:0005886|GO:0008515|GO:0015770
Lapu8g00111 507 CDD MFS_SLC45_SUC 37 493 - -
Lapu8g00111 507 MobiDBLite consensus disorder prediction 1 28 - -
Lapu8g00111 507 Gene3D MFS general substrate transporter like domains 31 494 IPR036259 -
Lapu8g00111 507 Pfam MFS/sugar transport protein 52 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00111 Lapu-Chr8 9818857 9831659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00111 5 502 Sucrose Transporter Gene Family AT1G09960 69.505 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00111 K15378 - gmx:100820483 873.618