Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00109 ATGAATAACATGCTTTATCCTGAAACTGAGAGTGTCTCAGCAAGGAAGAAGATAGAGATAATGAAAGAAATTGTTAAGGGTCGAGAAGCTGCTACTCAGCTGAAGCTTCTGCTTCAGAAACCCTCTGGGAGTGAAAACTCTCTCTCTTATCACCAACTCATGGCCAATGTCCTCACATCTTTCACACAATCTCTTTTTATTATTAACTCTTTCTCTTCGGAACCCAGTTCTGCAGATGGGGTGGCTCGTCGGAATCTTCTGAATCCCGGCGAATATGGGTCGCTGGTCACCGGTTCCGGCAAAGATCCAACGTCTGGAGATTGCAGTAAGAAGAGATCCCAAAAGGGTGGGAGAGGTCGCTACAATAGAAGGAAGGGTGCACCGACAAGAACCATACTCTCTTGCACCACTGATGATAATTATGCATGGAGGAAATATGGGCAAAAGGGAATTCTCAATTCTGAATATCCTAGGAGTTACTTCAGGTGCAGTTTCAAGTATGAGCGAGGTTGCCCAGCAATCAAACAGGTGCAGCTGGATGACGATAATCCAAATATGTATCGAACTACGTACATTGGTATTCACAGATGCAATGTTACACACAAAACCACAGATTCTTCCACTTGGGAATCATATGTTCCGAATTCTGATCGTGACTCCAATGTAAAGGATCATCTCATTAGCTCACCAAACTTAGCTATAAAACCAGAATTTCCCAAAGAAAGTGACACATCATGTGTTCTTACAGATGACAAGTTATTGGATCCTAGCATGTGGTTAAATTTGAAGGAATCTGAACCATCCAACCCTACCATTATGATAAGAAAGGAATCTGATAACTATGCAGATAGTGTGTATTCATGTACAGACTTTCAAAATCTGGACATGGATTTTGGTGGGGTGGCATCTGCTCATTTTCACACTCACTTTTACTTCGACCAAGATCAGTTCTTTTAG 957 0.4201 MNNMLYPETESVSARKKIEIMKEIVKGREAATQLKLLLQKPSGSENSLSYHQLMANVLTSFTQSLFIINSFSSEPSSADGVARRNLLNPGEYGSLVTGSGKDPTSGDCSKKRSQKGGRGRYNRRKGAPTRTILSCTTDDNYAWRKYGQKGILNSEYPRSYFRCSFKYERGCPAIKQVQLDDDNPNMYRTTYIGIHRCNVTHKTTDSSTWESYVPNSDRDSNVKDHLISSPNLAIKPEFPKESDTSCVLTDDKLLDPSMWLNLKESEPSNPTIMIRKESDNYADSVYSCTDFQNLDMDFGGVASAHFHTHFYFDQDQFF* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00109 318 SMART WRKY_cls 137 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g00109 318 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 208 IPR044810 GO:0003700
Lapu8g00109 318 Pfam WRKY DNA -binding domain 138 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g00109 318 ProSiteProfiles WRKY domain profile. 138 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g00109 318 MobiDBLite consensus disorder prediction 92 128 - -
Lapu8g00109 318 SUPERFAMILY WRKY DNA-binding domain 135 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g00109 318 Gene3D WRKY domain 128 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00109 Lapu-Chr8 9748743 9750880 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00109 16 212 WRKY Transcription Factor Family AT3G56400 39.698 3.61e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu8g00109 WRKY 3.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00109 - - gmx:100796071 328.946