Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00107 CTCACATCAGTTGTCCTTTCCAATGTTTTACATACTTTCGTCTCACGTTCTCTCTCCTTCTCCTTCTCTTTTCTCTTTCTCTATCTCGATCCCTTTCCCTTAGCCACTTCTTGCTATAATCTAGACCAGAGCAAACCGAAGACTAAAGTAAAACATCAAGAAAAACCGAATCTACAAACCTCACGCGTAAAGAAAATGAAAATGAACCTTTGCCCTGAAAGTGAAAGTCTCTCAGCCCAGAAGAAGAGAGAGATAATGGAAGAGCTTGTTAAGGGTCAGGAAGCTGTTACTAAACTCAGAAGAGTTCTGCTTCAGAATCCCTTTGGGAGTGAACCCTCTCTCTCTTCTCATCAACTCATGGCCAAGGTGCTCTCATCTTTCACAAACGCTCTTTCTGTTATCAACTCTTCTTTGGAACCCCGTTCTGCAGATGGGGTGCTTCATTCTAATCTCCTGTTTTCCGGCGAAAATGAGTCGCCGGTGCCTGCTTCCAGCAACGGTCCAACATCAGGAGATTGCAGTGAGAAGAGATCGCAAAAGGGTCGGAGAGGTCGCTACAATAGAAGAAAGAGTGCAGTGACATGGACTGCATTATCTTGCACTACAGATGATAATCATGCATGGAGGAAGTATGGACAAAAGGAAATCCTGAATTCTGAATTCCCTAGGAGTTACTTCAGGTGCAGTCATAAGTATGATCAAGGTTGTCGAGCAATGAAACAAGTGCAGCAAGATCAAGAGTATCCAGAGATGTACCGAACTACTTACATTGGCATTCACACATGCAATGCCATTCCTAAGGCTACACACTCAACCACAGATTCTTCCACTTGGGAATCTTATCTTCTCAATTCTGATCATGATTCTGATATGCAGAATCCCCTCATTAGCTCACCAACCTTGACCATAAAACAAGAATTTCCCAAAGAAAGTAACATATTCAGTGATCTTACAGATCACAAGCTATTGGAGCCTGTTGTGCTGTCAGATTTGAAGGATTTTGAACCATTCAAGCCCACCATTGTGCCCTAG 1032 0.4302 LTSVVLSNVLHTFVSRSLSFSFSFLFLYLDPFPLATSCYNLDQSKPKTKVKHQEKPNLQTSRVKKMKMNLCPESESLSAQKKREIMEELVKGQEAVTKLRRVLLQNPFGSEPSLSSHQLMAKVLSSFTNALSVINSSLEPRSADGVLHSNLLFSGENESPVPASSNGPTSGDCSEKRSQKGRRGRYNRRKSAVTWTALSCTTDDNHAWRKYGQKEILNSEFPRSYFRCSHKYDQGCRAMKQVQQDQEYPEMYRTTYIGIHTCNAIPKATHSTTDSSTWESYLLNSDHDSDMQNPLISSPTLTIKQEFPKESNIFSDLTDHKLLEPVVLSDLKDFEPFKPTIVP* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00107 343 Gene3D WRKY domain 188 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g00107 343 ProSiteProfiles WRKY domain profile. 197 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g00107 343 MobiDBLite consensus disorder prediction 156 188 - -
Lapu8g00107 343 Pfam WRKY DNA -binding domain 203 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g00107 343 SUPERFAMILY WRKY DNA-binding domain 199 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g00107 343 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 87 275 IPR044810 GO:0003700
Lapu8g00107 343 MobiDBLite consensus disorder prediction 156 174 - -
Lapu8g00107 343 SMART WRKY_cls 202 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00107 Lapu-Chr8 9715951 9724559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00107 81 289 WRKY Transcription Factor Family AT3G56400 41.232 2.26e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu8g00107 WRKY 2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00107 - - vum:124822494 355.14