Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00094 ATGAAGTTCCAATTCCATGCTGTTTCATTTGTTCTGCTAAGCTTCATAGTGTCTTTCTTTGGCCTGATTGTAGCTGACTTGAACTCCGACAGACTAGCTCTCCTTGAGTTCTTTTCAAATGTTCCACATGCTCCAAGGTTAAATTGGAGAGAGTCAACTCCAATTTGTACTTCTTGGGCTGGTGTGACTTGCAACCAAAACGAAACTAGTGTCATTGGCATCCATCTTCCAGGGGCAGGTTTCAAGGGCTCCATTCCAGAGAACAGCCTAGGAAAACTAGATTCTCTTAAAATTCTGAGCCTTCACTCCAATGGACTTAGAGGAAACCTTCCTTCTGACATCCTCTCTATTCCTTCACTCCAATATGTAAACCTGCAGCAAAATAACTTCTCAGGTCTAATCCCTTCTTCTATCTCCCCCAAACTCGTAGCATTAGATATTTCCTCTAACAATTTCTCTGGAAGTATCCCACCTACCTTTCAGAATCTCCGTAGACTCACCTGGTTGTATCTCCAAAACAATTCCCTTTCTGGGGCTATCCCTGATTTCAACTTTCCAAGTCTCAAGTATTTGAATTTGAGCTATAACAACTTGAATGGCTCAATTCCAAATTCCATCAACAATTATCCATACACTTCTTTTGCTGGGAACTCTCACTTGTGTGGACCACCTCTCAATAACTGTTCTGCAGCCTCCACTCCATCTTCTTCTTCTTCTTCCTCCTCTCATTCTCCTTCTCCTGTTTATCAACAACTCTCTCCAGCAGCAGCTCCCCAAAATAGAAGTGCTACCACTACAAAGAGTTATTTTGGCCTCGCTTCTATACTTGCTCTGGCAATTGGGGGCTGTGCCTTCCTCTCTCTCCTGGTTTTGGTGATGTTTGTATGCTGTTTAAAGTGGAAGGAGAGCCAAAGCAGTGGCATAATTACAGGAAAGGCACCGTATGCTGGAAAGACTGAGGTTTCAAAGAGTTTTGGGAGTGGGGTGCAAGAGGTTGAAAAGAACAGGTTGTTTTTCTTTGAAGGTTGCTCTTACAGCTTTGACCTCGAAGATTTGTTAAAGGCTTCAGCTGAAGTTCTTGGAAAGGGGAGCTATGGAACAACATATAGGGCTGCTTTGGAGGATGGAACAGCAGTGGTTGTTAAAAGGTTGAGGGAAGTTCTAGTTGGAAAGAAGGAGTTTGAGCAGCAGATGGAGGTTGTAGGAAGAATTGGTCGGCACCCCAATGTTATGCCCCTTCGAGCTTTTTACTTTTCCAAAGATGAGAAACTTCTAGTCTATGACTACATGCCTGGAGGCAGCTTGTTTTCCTTGTTACATGGAAACAGAGGCATGGGAAGAGCTCCATTAGACTGGGATTCAAGAATGAAGATAGCACTTGGAGCTGCAAAAGGAATTGCTTCCATTCACACTGACCACATGGATTCAAAACTTATTCATGGCAACATCAAGTCCTCCAATGTGCTCATAACCCAAGAACATGATGGTTGCATCACTGATGTAGGACTCACTCCTACAATGACCACCCAATCAACCATGTCAAAACCCAACGGCTACCGAGCTCCCGAAGTAACCGAGTACCGGAGGATCACTCAGAAGTCTGACGTTTACAGCTTTGGAGTACTCCTTCTTGAAATGCTCACTGGCAAGGCTCCAATGGGATATCCTGGCTATGAGGACATGGTTGATCTTCCTAGGTGGGTGAGGTCTGTGGTTCGAGAAGAATGGACTGCTGAAGTTTTTGATGAGGAACTGCTTAGAGGGCAGTATTTTGAAGAGGAAATGGTGCAGATGCTTCAGATTGCACTGGCATGTGTGGCAAAGGTGGCAGATAATAGGCCAACAATGGATGAAACTGTTAGGAACATAGAGGAAATTAGGCTTCCTGAGTTGAATAACCGTAACACATCATCTGAGTCTGAATCTAATGTACAAACTCCATGA 1944 0.4398 MKFQFHAVSFVLLSFIVSFFGLIVADLNSDRLALLEFFSNVPHAPRLNWRESTPICTSWAGVTCNQNETSVIGIHLPGAGFKGSIPENSLGKLDSLKILSLHSNGLRGNLPSDILSIPSLQYVNLQQNNFSGLIPSSISPKLVALDISSNNFSGSIPPTFQNLRRLTWLYLQNNSLSGAIPDFNFPSLKYLNLSYNNLNGSIPNSINNYPYTSFAGNSHLCGPPLNNCSAASTPSSSSSSSSHSPSPVYQQLSPAAAPQNRSATTTKSYFGLASILALAIGGCAFLSLLVLVMFVCCLKWKESQSSGIITGKAPYAGKTEVSKSFGSGVQEVEKNRLFFFEGCSYSFDLEDLLKASAEVLGKGSYGTTYRAALEDGTAVVVKRLREVLVGKKEFEQQMEVVGRIGRHPNVMPLRAFYFSKDEKLLVYDYMPGGSLFSLLHGNRGMGRAPLDWDSRMKIALGAAKGIASIHTDHMDSKLIHGNIKSSNVLITQEHDGCITDVGLTPTMTTQSTMSKPNGYRAPEVTEYRRITQKSDVYSFGVLLLEMLTGKAPMGYPGYEDMVDLPRWVRSVVREEWTAEVFDEELLRGQYFEEEMVQMLQIALACVAKVADNRPTMDETVRNIEEIRLPELNNRNTSSESESNVQTP* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00094 647 FunFam pollen receptor-like kinase 1 322 429 - -
Lapu8g00094 647 PANTHER OS05G0588300 PROTEIN 11 639 - -
Lapu8g00094 647 Gene3D Transferase(Phosphotransferase) domain 1 430 645 - -
Lapu8g00094 647 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Lapu8g00094 647 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Lapu8g00094 647 SUPERFAMILY L domain-like 40 225 - -
Lapu8g00094 647 ProSiteProfiles Protein kinase domain profile. 354 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00094 647 Pfam Protein tyrosine and serine/threonine kinase 358 622 IPR001245 GO:0004672|GO:0006468
Lapu8g00094 647 FunFam Probable inactive receptor kinase RLK902 27 184 - -
Lapu8g00094 647 Gene3D Ribonuclease Inhibitor 29 140 IPR032675 -
Lapu8g00094 647 ProSitePatterns Protein kinases ATP-binding region signature. 360 391 IPR017441 GO:0005524
Lapu8g00094 647 Gene3D Ribonuclease Inhibitor 141 230 IPR032675 -
Lapu8g00094 647 Gene3D Phosphorylase Kinase; domain 1 320 429 - -
Lapu8g00094 647 MobiDBLite consensus disorder prediction 628 647 - -
Lapu8g00094 647 Pfam Leucine Rich Repeat 187 207 IPR001611 GO:0005515
Lapu8g00094 647 SUPERFAMILY Protein kinase-like (PK-like) 358 622 IPR011009 -
Lapu8g00094 647 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Lapu8g00094 647 MobiDBLite consensus disorder prediction 629 647 - -
Lapu8g00094 647 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 430 637 - -
Lapu8g00094 647 MobiDBLite consensus disorder prediction 232 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00094 Lapu-Chr8 9483487 9487905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00094 8 645 Receptor kinase-like Gene Family AT5G58300 56.105 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu8g00094 PK_Tyr_Ser-Thr 4.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00094 - - vum:124839146 1159.44