Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00086 ATGTTCTCAAAACTTCATCCACAACACCAACCTTTTCAATTTCCTCGGGAATGTCAAACATCCGAGGACGACGACAGCCGGAGTAGCCCTGGGCCCAACCTCGCTGCCCAGAAGCCCCTCTCAGGTGATGGAGCCACAATTGAAGTAGTGCGGCGGCCCAGGGGCCGCCCTCCCGGCTCCAAAAACAAGCCCAAGCCGCCTCTTGTTATTACCCAAGAGCCCGACCCTGCCATGAGCCCCTTCATTTTAGAAATCCCCGGCGGCAACGATGTCGTCGAGGCTCTAGCCCGGTTCAGCCGCAGAAAGAACACGGGCCTGTGTGTCCTCACCGGTTCGGGAACCGTCGGTAACGTCACTCTCCGCCAACCCTCTGTAGCTCCCGCCGGTACCGTCACCTTCCACGGCCGCTTCGACATCCTCTCCATGTCCGCCACCTTCCTCCTCCACGCCCCCCCGCCGCCTGCCCCGCCCTCCACCTTCGCCGTCTCGCTAGCCGGACCGCAGGGGCAGATCGTCGGCGGACACGTCGCTGGAAGGCTGCTCGCTGCCGGGACTGTGTTCGTCATCGCCGCGTCGTTCAACAACCCATCCTTCCACCGGCTATCTTCGGAGGACGACGCGCATAATAACTCCGCATCCGGTGGCGGCGACGGACAGTCGCCACCCGCCTCGGGTGGCGGCGCGGAGAGCGGACAACTTCCGGCGGAGTCGTGTATGTACAGCTGTCACCTCCCTTCGGACGTGATTTGGGCTCCAACGGCTAGACCACCTTTCTGA 777 0.6268 MFSKLHPQHQPFQFPRECQTSEDDDSRSSPGPNLAAQKPLSGDGATIEVVRRPRGRPPGSKNKPKPPLVITQEPDPAMSPFILEIPGGNDVVEALARFSRRKNTGLCVLTGSGTVGNVTLRQPSVAPAGTVTFHGRFDILSMSATFLLHAPPPPAPPSTFAVSLAGPQGQIVGGHVAGRLLAAGTVFVIAASFNNPSFHRLSSEDDAHNNSASGGGDGQSPPASGGGAESGQLPAESCMYSCHLPSDVIWAPTARPPF* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00086 258 MobiDBLite consensus disorder prediction 1 74 - -
Lapu8g00086 258 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 195 IPR005175 -
Lapu8g00086 258 CDD DUF296 80 193 IPR005175 -
Lapu8g00086 258 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 23 222 IPR014476 GO:0003680
Lapu8g00086 258 SUPERFAMILY AF0104/ALDC/Ptd012-like 77 205 - -
Lapu8g00086 258 PIRSF ESCAROLA 1 249 IPR014476 GO:0003680
Lapu8g00086 258 MobiDBLite consensus disorder prediction 200 233 - -
Lapu8g00086 258 Gene3D - 79 211 - -
Lapu8g00086 258 FunFam AT-hook motif nuclear-localized protein 79 212 - -
Lapu8g00086 258 ProSiteProfiles PPC domain profile profile. 75 214 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00086 Lapu-Chr8 9280092 9281225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00086 43 257 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 65.502 7.43e-97 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00086 - - gmx:100811053 385.571