Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00083 ATGCTTCCCTTTCGGAGATTCTATGGGTTCCAGAGTTGGCTAGACCACGACTCTACCCACCTCCCCAACTCCTTCATTAAAAGGGCAGTGGAGTTCGACGCCGCCAGATCAAAAACGGAGCGCAAATCAACTGAAGCATGCAAGAGTCACAGGGAAGCCGAGAGGAGACGCAGGCAGAGAATCAACTCCCACCTCTCCACCTTACGTTCCCTCCTTCCTAACGCCGCCAAGTCGGATAAAGCGTCGCTGCTGGCGGAGGTTGTTGAGCACGTCAAACGGTTAAGGAAGCAAGCCGATGACGTGGCGTGCGGGGACGGCGGCGAACCGGGTGCGGTTCGGTCTGAGGCGTGGCCGCTTCCCGGGGAGTGTGACGAGGCGACGGTGAGTTGGTGCGAGGGGGAGGCACGGCGGGTGAAGGCGACGGTGTGCTGTGAGGACCGGGCCGGTCTGAACCGGGACGTTACAAGGGCAATCCGGTCGGTTCGGGCAAAGCCGGTTCACGCGGAAATGATGACGGTTGGGGGAAGGACGAAGAGTGTGGTGGTGGTGGAGTGGGGGGAAGAGGAGATGGAGGGAAAAGAGGTTGGGGCGCTGGAACGGGCTTTGAAGGCCGTGGTAGAGAATCGGGCTTTGGTGGGCTATGGAATGGGCCCAGTTGTTTTGGGCCAGAAACGGGGTAGGGATTGTTGCGGTTCGCCTAGCTCTTGTTGA 711 0.5977 MLPFRRFYGFQSWLDHDSTHLPNSFIKRAVEFDAARSKTERKSTEACKSHREAERRRRQRINSHLSTLRSLLPNAAKSDKASLLAEVVEHVKRLRKQADDVACGDGGEPGAVRSEAWPLPGECDEATVSWCEGEARRVKATVCCEDRAGLNRDVTRAIRSVRAKPVHAEMMTVGGRTKSVVVVEWGEEEMEGKEVGALERALKAVVENRALVGYGMGPVVLGQKRGRDCCGSPSSC* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00083 236 PANTHER TRANSCRIPTION FACTOR BHLH30 20 227 IPR045847 GO:0003700|GO:0006355
Lapu8g00083 236 SMART finulus 51 100 IPR011598 GO:0046983
Lapu8g00083 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 100 IPR036638 GO:0046983
Lapu8g00083 236 Gene3D - 39 102 IPR036638 GO:0046983
Lapu8g00083 236 Pfam Helix-loop-helix DNA-binding domain 47 94 IPR011598 GO:0046983
Lapu8g00083 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00083 Lapu-Chr8 9235123 9236379 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00083 34 207 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G25710 38.500 2.13e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu8g00083 HLH 8.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00083 - - gmx:100816394 360.533