Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00082 ATGCACAACACAACACGCACCGAAGCGGAGCGTCTTCTTGGGATCGCAGAGAAGCTTCTTCAGAACCGTGATTTAATGGGTTCGCGCGAGTTCGCCATCCTCGCGCAGGAAACTGAGCCTCTTCTCGAAGGTTCCGACCAGATCCTCGCCATCGTCGACGTGCTCCTCGCCGCCGACAAGCGCGTTAACAATCACCCGGACTGGTACGCCGTCCTCCAGGTCGATCGGCGCTCCGACGACCTCGACCTCATAAAAAAACAGTACCGCCGCCTGGCGCTCCTCCTCCACCCGGACAAGTCCCGCTTCGCCTTCGCCGACCACGCCTTCAAGCTCGTAGCCGACGCGTGGTCCCTACTCGCGGATCCCGTGAAGAAGTCCGTCTACGACAAAGAGCTCTCGTTCTTCTCCCGCGTCGATTTGTCCGTTCCCGGATGGGTCCAGCAGGAAAAGCTCTCAGTCCGCAGGCCTGCGCCTGTTCCTACACCTGAACCCGGGCCCAGCGCCCGTAACAGTGCTTCGGCCCGCGAGCAAATTCACGCTGATGAAAATTTCCGCAGGAGAAACTCAACTTTCTGGACTGCGTGCCCCTATTGTTACCGTTTGTATGAATACCCTAGGGTTTACGAGGGTAATTGTCTACGGTGCCAGAATTGCGATAGGTCCTTCCACGGCGTGGCGGTTCCGTCGCTGCCGCCGCTGGTCCCAGGCCAGGACGCGTATTATTGCTGCTGGGGGTTCTTTCCAATGGGGTTTGTAATGGGTGACTTCGGCTCACCGGAGAAAGAGTCGCCGGCAGTGCCTGCACCGCAGCCTCCTCCTCCCCCGCCTCCGCCTCCATCTCAACCCGCTTCTTCTCTGCCGAATTGGATGCCTGTGCCGGCGGAGAACGGTGCGCCGGCGACGCCGGTGGCGGCGAGGGTGACTCGGTCAGGGGCGACGGTGGCGGCAAGAGCGACAAACGGAACCGGGCCGAAGAAGAGGGGGAGGCCGAGGAAGTATCCGTTGCAGTCGTGA 1014 0.6095 MHNTTRTEAERLLGIAEKLLQNRDLMGSREFAILAQETEPLLEGSDQILAIVDVLLAADKRVNNHPDWYAVLQVDRRSDDLDLIKKQYRRLALLLHPDKSRFAFADHAFKLVADAWSLLADPVKKSVYDKELSFFSRVDLSVPGWVQQEKLSVRRPAPVPTPEPGPSARNSASAREQIHADENFRRRNSTFWTACPYCYRLYEYPRVYEGNCLRCQNCDRSFHGVAVPSLPPLVPGQDAYYCCWGFFPMGFVMGDFGSPEKESPAVPAPQPPPPPPPPPSQPASSLPNWMPVPAENGAPATPVAARVTRSGATVAARATNGTGPKKRGRPRKYPLQS* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00082 337 SUPERFAMILY Chaperone J-domain 59 132 IPR036869 -
Lapu8g00082 337 SMART dnaj_3 66 124 IPR001623 -
Lapu8g00082 337 PRINTS DnaJ domain signature 104 124 IPR001623 -
Lapu8g00082 337 PRINTS DnaJ domain signature 88 103 IPR001623 -
Lapu8g00082 337 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lapu8g00082 337 MobiDBLite consensus disorder prediction 153 176 - -
Lapu8g00082 337 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Lapu8g00082 337 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Lapu8g00082 337 CDD DnaJ 67 121 IPR001623 -
Lapu8g00082 337 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 283 - -
Lapu8g00082 337 Gene3D DnaJ domain 56 139 IPR036869 -
Lapu8g00082 337 MobiDBLite consensus disorder prediction 259 337 - -
Lapu8g00082 337 MobiDBLite consensus disorder prediction 264 286 - -
Lapu8g00082 337 Pfam DnaJ domain 67 129 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00082 Lapu-Chr8 9208561 9209975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00082 2 335 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 47.899 1.50e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00082 - - gmx:100816918 541.962