Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00043 AGAGTCTTTGCCTTCTTGTTTGGTCCCCCTGATTATGGAGCTGGGCAATTGGACACAAGACGATATGGTGAGCAATATGCAAGCAAAGGAGAGGATGGAGATCGTGCTTTACTCCCAGAGCAGACCCCTTCTATAAAGATCTGGTATTTAACTTATGTTCTTGTCACTCCTGTCTCCTTTTTTTTAGAAGTGGAAGAATTGACACGTGTATTACAAGCTGCTGTTACTGTTCAAGCTGGTGTATGTGTTGACATATTTGTTGTAACAAATGAGTACACTGATTTGGCATCCCTAAAGTTTCTGAGAACCTTACTTTTATACACAAGTACCGAGGATTCAACATTGCCTCAGGACATATATCGAATGCTGAGTCGACCATATGCTTTTGGTTGTGTCCTGCGATTAAGAACCTCAACGAAATTTAAACCTGGCAATTCTGTGCAAATTGGGTCAGATGCTTTCACTTATGACTATGTTTATGGTAGTTCGGGATCTCCGTCGTCCACAATATACAATGATTGTGTAGCTCCACTTGTAGATGCGCTTTTTCACGGCTACAACGCAACCGTTCTTGCTTATGGCCAGACCGGATATGGGAAGACATACACCATGGGCACCAATTATACCGGAGAAGAAAATGCGAGTGGTATTATACCCAAGGTGATGGAGACAATATTGAAGAGGGTTCAGACTATGAAGGAATCCTCAGACTTTTTTATTAGTTTATCGTTTATTGAGATATTCAAGGAAGAGGTGTTTGATTTACTTGATCCCAATCAATCTAGAGGAGATGTGGTGTCTACTGCGAAGTCTGCTTCTCCCAGCAGAGTTCCCATACAAATTAGGGAAACAGTGAATGGAGGAATAACATTGGCTGGTGTTACCGAGGCTGAAGTAAAGACTAAAGAAGAAATGTCATCTTATCTTTCTCGAGGTTCACTGTCACGTGCCACTGGGAGTACAAATATGAACAGTCAATCAAGGTAA 987 0.4164 RVFAFLFGPPDYGAGQLDTRRYGEQYASKGEDGDRALLPEQTPSIKIWYLTYVLVTPVSFFLEVEELTRVLQAAVTVQAGVCVDIFVVTNEYTDLASLKFLRTLLLYTSTEDSTLPQDIYRMLSRPYAFGCVLRLRTSTKFKPGNSVQIGSDAFTYDYVYGSSGSPSSTIYNDCVAPLVDALFHGYNATVLAYGQTGYGKTYTMGTNYTGEENASGIIPKVMETILKRVQTMKESSDFFISLSFIEIFKEEVFDLLDPNQSRGDVVSTAKSASPSRVPIQIRETVNGGITLAGVTEAEVKTKEEMSSYLSRGSLSRATGSTNMNSQSR* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00043 328 PRINTS Kinesin heavy chain signature 185 206 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu8g00043 328 PRINTS Kinesin heavy chain signature 321 328 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu8g00043 328 Pfam Kinesin motor domain 146 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu8g00043 328 Gene3D Kinesin motor domain 125 328 IPR036961 -
Lapu8g00043 328 MobiDBLite consensus disorder prediction 306 328 - -
Lapu8g00043 328 Gene3D von Willebrand factor, type A domain 1 124 IPR036465 -
Lapu8g00043 328 ProSiteProfiles Kinesin motor domain profile. 128 328 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu8g00043 328 SUPERFAMILY vWA-like 1 125 IPR036465 -
Lapu8g00043 328 SMART kinesin_4 116 328 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu8g00043 328 MobiDBLite consensus disorder prediction 305 328 - -
Lapu8g00043 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 327 IPR027417 -
Lapu8g00043 328 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 139 327 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00043 Lapu-Chr8 8363092 8370133 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00043 156 327 Calmodulin-binding Proteins AT5G65930 32.203 1.32e-15 76.3