Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00014 ATGGCCAGAGAGGTTAACAAGCAAAAGGTTAAGGTTCCTTTTAACGAAGAAGACGCTGCTTCTCTTTTGCAAAGATATGACGCACGAACGGTTTTAACACTACTTCAGGAATTGGCGAATTATCCATATTCCGAGTTTAACTGGAATGATTTGGTGGCGAAAACGTCAACTGGAATTTCTAATGCTAGAGAATATCAGATGCTGTGGCGACATTTGGCGTATGGTCACTCCATGGAAAATTTGGATCACCATGCTCAACCTATGGATGATGACAGTGACTTGGAAAGTGAACGAGAAGTATTACCCTGCTTAAACAGAGAAACTGCAATAGAAACTGCAGCATTTGTTCAGGTAATCATTGCATCTTTTAAGCTTAGTGAATCAACTCCTACTAGCTCGGTGATTCAAGCTCCATTGACTATAAAGGCTCCAATCTGTGATTCATCTACCATTTCTAATAAGGAAAGTTCGCAAAATACAGACATTATTTTTCCTGTAACAGTCAAGAGACAGACACTGCCGAATGCATCATCAACAAGAGTTGTGGAAGCCAGTGGGTCAGTTAGTGGCAACACATCCATTAAAAAGAAAAGAGAACCATGGTCAGAGCAAGAGGACATGCAATTACGAGATGCTGTTGAGAGGTGGGGTGAAGGTAATTGGGCTAGTATGATTAAAAGAGACGACTTTCCTATCAAGAGGAGTACCTCACAGTTATCTAAGGTCATGTGA 732 0.4098 MAREVNKQKVKVPFNEEDAASLLQRYDARTVLTLLQELANYPYSEFNWNDLVAKTSTGISNAREYQMLWRHLAYGHSMENLDHHAQPMDDDSDLESEREVLPCLNRETAIETAAFVQVIIASFKLSESTPTSSVIQAPLTIKAPICDSSTISNKESSQNTDIIFPVTVKRQTLPNASSTRVVEASGSVSGNTSIKKKREPWSEQEDMQLRDAVERWGEGNWASMIKRDDFPIKRSTSQLSKVM* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00014 243 CDD SANT_TRF 200 240 - -
Lapu8g00014 243 Pfam Myb-like DNA-binding domain 198 225 IPR001005 -
Lapu8g00014 243 SUPERFAMILY Homeodomain-like 195 239 IPR009057 -
Lapu8g00014 243 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 240 - -
Lapu8g00014 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 193 223 IPR017930 -
Lapu8g00014 243 MobiDBLite consensus disorder prediction 185 206 - -
Lapu8g00014 243 Gene3D - 191 242 - -
Lapu8g00014 243 ProSiteProfiles Myb-like domain profile. 193 238 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00014 Lapu-Chr8 7089390 7100012 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu8g00014 Myb_DNA-binding 1.8e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00014 - - gmx:100819057 327.791