Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02663 ATGGGTTGTTTTTCTTGTTTCGATTCGAGGGAAGACGAGAAGCTGAATCCCAATCCTCACCAGGAAAACCACCACCACCATCATCATCATCACGATCATGATCTTAATCCCCCTATCCCCTCGCGTATTTCCCGACTTCCCTCTGCCTCTGGAGCAGACAAACTACGCTCATCAAGTAATGCCAATGGTAATGGCAATGGTAATAATGGCGACTCCAAAAGGGAATTGGCTGGTCTCAAGGATGGACCTGCTGTTCAAATTGCCGCACAAACTTTCACATTCCGTGAGCTGGCAGCCGCAACCAAAAATTTCAGGCCCCAATCCTTTTTGGGGGAAGGTGGTTTCGGAAGGGTCTACAAGGGCCGCCTTGAAACCACTGGTCAGGCTGTGGCTGTTAAACAGCTAGACAGAAACGGTCTTCAGGGTAACCGGGAATTCCTCGTGGAGGTTCTCATGCTCAGTCTTCTACACCACCCTAATCTTGTCAATCTCATTGGATACTGTGCGGATGGGGATCAACGCCTCTTAGTTTATGAGTTTATGCCATTGGGATCTTTGGAAGACCACCTTCATGATCTTCCCCCGGATAAGGAACCATTGGATTGGAACACTAGGATGAAAATAGCTGCTGGGGCAGCAAAAGGATTGGAATACCTTCACGACAAAGCAAATCCTCCGGTCATTTATAGAGACTTCAAATCGTCTAATATATTACTTGACGAAGGTTACCATCCAAAGCTTTCAGACTTTGGTCTTGCAAAGCTCGGTCCAGTTGGTGACAAATCACACGTTTCCACACGTGTCATGGGAACTTATGGTTACTGTGCCCCCGAATATGCTATGACTGGACAGCTGACTGTTAAGTCTGATGTATATAGTTTTGGGGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCAGCCGACCCCATGGAGAACAAAACCTTGTCACATGGGCACGTCCACTGTTCAATGACCGCAGGAAGTTTCCAAAGTTAGCAGATCCAGAGCTGCAGGGACGGTATCCCATGCGGGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAACAGGCCGCAGCGCGTCCTCTCATTGGGGATGTGGTGACAGCCCTTTCTTTTCTAGCCAACCAGGCATATGAGCACAGGGGAGGTGGTGATGATAAAAGGAACAGAGATGATCAAGGTGCAAGAATATTGAAAAATGACCAAGGTGGAGGATCTGGAAGGAGATGGGATTTGGAAGGATGTGAGAAAGATGAGTCCCCACGTGAAACTGCAAGGATGTTAAACAACAGGGATCTTGATAGAGAACGTGCGGTGGCTGAAGCCAAGATGTGGGGAGAGAATTGGAGAGAGAAAAGACGACAAAGTGCGCAGGGCAGTTTTGATGGTTCTAATGCCTAG 1425 0.48 MGCFSCFDSREDEKLNPNPHQENHHHHHHHHDHDLNPPIPSRISRLPSASGADKLRSSSNANGNGNGNNGDSKRELAGLKDGPAVQIAAQTFTFRELAAATKNFRPQSFLGEGGFGRVYKGRLETTGQAVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSSRPHGEQNLVTWARPLFNDRRKFPKLADPELQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSFLANQAYEHRGGGDDKRNRDDQGARILKNDQGGGSGRRWDLEGCEKDESPRETARMLNNRDLDRERAVAEAKMWGENWREKRRQSAQGSFDGSNA* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02663 474 MobiDBLite consensus disorder prediction 388 405 - -
Lapu7g02663 474 MobiDBLite consensus disorder prediction 51 71 - -
Lapu7g02663 474 MobiDBLite consensus disorder prediction 418 465 - -
Lapu7g02663 474 Gene3D Phosphorylase Kinase; domain 1 88 180 - -
Lapu7g02663 474 SUPERFAMILY Protein kinase-like (PK-like) 86 380 IPR011009 -
Lapu7g02663 474 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Lapu7g02663 474 Gene3D Transferase(Phosphotransferase) domain 1 181 402 - -
Lapu7g02663 474 MobiDBLite consensus disorder prediction 388 474 - -
Lapu7g02663 474 ProSiteProfiles Protein kinase domain profile. 104 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02663 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Lapu7g02663 474 CDD STKc_IRAK 110 378 - -
Lapu7g02663 474 Pfam Protein kinase domain 107 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02663 474 FunFam Serine/threonine-protein kinase PBS1 181 396 - -
Lapu7g02663 474 MobiDBLite consensus disorder prediction 11 77 - -
Lapu7g02663 474 PANTHER OS07G0668900 PROTEIN 3 389 - -
Lapu7g02663 474 FunFam Serine/threonine-protein kinase PBS1 78 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02663 Lapu-Chr7 42798387 42804597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02663 1 462 Glycoside Hydrolase AT3G07070 56.061 3.16e-170 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lapu7g02663 Pkinase 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02663 K13430 - gmx:100777987 837.025