Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02661 ATGGCAGCTGCATTTACATCTACAACTCCCACACTCAGACTGTCGAATGTTGGAGAAATCAAAGGTTTGCATCTCTCTAACCCTAATCCTAACAGCCTGAAGCTTAGGACTCGGGGGTTTGGGTTTGGATTTCGCGGTTGTTATGGAGTGACAGCGAGTGAGAGAGAAAGGAAAGTTGGAAGGGGTTTGAGGGTTGGGGCGAGTTCTTTTTCTTCTCCGGGTGAGGGTGAGGGTGAGGACGCAAGTGTTCAGGCCAAAGTGACTCAGAAAGTATTCTTCGACATCGGTATTGGAAATCCAGTTGGGAAGCTTGTTGGACGGATTGTGATTGGACTGTACGGCGACGATGTTCCCCAAACAGCTGAGAACTTCCGCGCCCTCTGCACTGGCGAGAAGGGCTTCGGCTATAAGGGCTCTGCCTTCCATCGCGTCATCAAGGATTTCATGATTCAAGGAGGCGATTTTGACAAAGGAAATGGAACTGGAGGCAAAAGTATATATGGTCGCACTTTTAAAGATGAGAATTTTAATTTGTCTCATACTGGACCCGGAGTTGTTAGCATGGCAAATGCAGGTCCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTGAAGACACCATGGTTGGATCAGAGACATGTTGTATTTGGCCAAGTGTTGGAAGGGATGGACATTGTTAGGTTGATCGAATCGCAGGAGACAGATAGGGGTGACCGTCCTAGAAAAAAAGTGACCATCAGTGACTGTGGTGAGCTTCCAGTTGCCTGA 771 0.4773 MAAAFTSTTPTLRLSNVGEIKGLHLSNPNPNSLKLRTRGFGFGFRGCYGVTASERERKVGRGLRVGASSFSSPGEGEGEDASVQAKVTQKVFFDIGIGNPVGKLVGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFNLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLIESQETDRGDRPRKKVTISDCGELPVA* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02661 256 Gene3D - 76 256 IPR029000 -
Lapu7g02661 256 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 102 252 IPR002130 GO:0000413|GO:0003755
Lapu7g02661 256 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 106 251 IPR002130 GO:0000413|GO:0003755
Lapu7g02661 256 SUPERFAMILY Cyclophilin-like 86 253 IPR029000 -
Lapu7g02661 256 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 90 253 - -
Lapu7g02661 256 FunFam Peptidyl-prolyl cis-trans isomerase 77 256 - -
Lapu7g02661 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 141 153 IPR002130 GO:0000413|GO:0003755
Lapu7g02661 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 127 IPR002130 GO:0000413|GO:0003755
Lapu7g02661 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 199 211 IPR002130 GO:0000413|GO:0003755
Lapu7g02661 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 184 199 IPR002130 GO:0000413|GO:0003755
Lapu7g02661 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 212 227 IPR002130 GO:0000413|GO:0003755
Lapu7g02661 256 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 136 153 IPR020892 GO:0003755|GO:0006457
Lapu7g02661 256 CDD cyclophilin_ABH_like 90 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02661 Lapu-Chr7 42783462 42787050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02661 106 247 U-box Gene Family AT5G67530 48.951 8.64e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02661 K03768 - gmx:100777088 397.127