LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu7g02639	GCCTCTGCTGAGACTCACCATAATGTTAGCATCGGTGATGCCCTTATTGCAGGTAATGAGGGTGCCCAGTGGCTTTCTCCATCAGGAGAGTTTGCATTTGGATTTCATCAGCTTGAGAATAATTCCCTTTTCTTGCTTGCCATAAGATACCAAAACATACCTCATGCCTCTTTCATTTGGTATGCAAATGGAGACAACCTTGCTCCTAAAGGCTCAAAACTAGAGCTTAGTAAAAACAGTGGGCTGGTGCTGAAAACCCCTCAGGGAGTGGAGCTATGGACATCACAGCTCATATCAGGTACTATTTCCTATGGACTAATGAATGACACAGGCAACTTCCAGCTTCTAGATGAGAATTCACAGATGTTGTGGGACACTTTCAGCAATCCAACTGATACCTTGGTGCCTACTCAAATCATGGAGGTTCGAGGCACGCTTTCATCGCGCCAGAAAGAGACCAACTTCTCACGAGGAAGGTTCCAATTTCGCTTGCTTCCAGATGGTAATGCCGTGCTTAATCCTATAAATTTGCCTACCAACCGCACTTATGAGGCTCACTACCACAGTAACACTTATGATCAGAACAATGCAACAAACTCTGGTTTCCGAGTGATGTTCGATAATTCAGGATTAGCAACCATAAATTTTGATGGAACTTTCACCATATCCCGTTACCCCAAAAGTGGAGCTTCAAATCCAAGCTGGACAGTTATAAAGACATTGCCAGACAACATTTGCATGGACTTGGAAGGAAAGACGGGTGGTAGTGGGGTCTGTGGATTCAATAGTATCTGCACTCTCGAAGCTGATCAAAGACCTAAGTGCAATTGCCCAGAGGGCTATTCGCTTCTTGATTCAACTGATGAGTATGGCAGCTGCAGACCAAATTTGGAACTCGGTTGTGGAGGAAGTGGACAAAGATTGCAAGAAGATATGTACTTCATGAAGGAAATGGCAAGTACTGATTGGCCTCAATCAGATTATGAACTGTATGAACCTTACAATTCAGAAGACTGCAAGAATTCTTGCTTGCACGATTGCTTATGTGCTGTTTCTGTTTTTAGAGATGATAGCTGCTGGAAGAAGAAGCTGCCTCTCTCAAATGGAAGACGGGATGGAGAAGTTGGGGGATCTGCTTTCATTAAGTTGAGGAAAAATGATGCTGTGCTAGGTAGTCCTTCAAATCCATTCATAAAAGAGAAGGAAAATGTAAAGGATCAAGACACTTTGATAACTGTGATATCGGTCCTTCTAGGAGGTTCTGTCTTTGTGAATCTCGGGGTGGTCAGTGCAGTATGTATTGGTTTCCACTTCTGCTACAAGAAGAGAAGTTCTACCAATAATACTGTTGCAGAGAGCAATTTGCGCAGTTTCACCTTTAGAGAGATTGTGCAAGCAACATATAACTTCAAAGAAGAATTGGGAAGGGGGTCTTGCGGCATTGTCTTTAAAGGAACAACACAGTCGGCTACTATTGCGGTAAAAAAACTGGACAAGGTGCTCAAAGACAGCGATAAGGAATTCAAAACAGAAGTGAATGTGATAGGCCAAACTCATCACAAAAACTTGGTTCGCCTGATTGGATATTGTGATGAGGTAGAACACCGGATTCTGGTGTATGAGTTTTTGAGCAATGGCACTTTAGCAAATTTCCTTTTCGGAGATTTCAAACCAAATTGGAACCAAAGAGTACATATTGCCTTTGGGATATCAAGAGGACTGGTTTATTTGCACGAGGAATGCTGCACCCAGATCATCCATTGTGACATAAAGCCTCAAAATATACTTCTTGATGAGCATTACAATGCTAGAATATCAGATTTTGGGTTGTCAAAGCTACTCATGATTAATCAAAGCCGCACAGAAACTGGCATTCGAGGAACAAAAGGGTATGTTGCACCAGACTGGTTCAGGAGTGCGCCAATCACAGCCAAGGTTGATGTCTACAGTTTTGGTGTGCTGCTTCTGGAGATCATCTGCTGCAGGAGAAATGTAGATGATCAATTTGGGTTCGAAGAGAAGGGCATTTTAACTGACTGGGCTTATGACTGCTATAGGGCTGGAAGAATAGACATTCTGGTTGAAAATGATAATGAGGCTATCAATGACATAAATAGGTTGGAAAGGTTTGTGATGGTAGCTGTTTGGTGCCTTCAAGAGGATCCCTCTCTCAGGCCAACAATGAAGAAGGTGATGCTGATGCTGGAAGGGATAGCTCCAGTCACAATTCCACCAAGTCCCTACCCTTATACCTCTGTGGCTGTTAGTTGCGGT	2274	0.431	ASAETHHNVSIGDALIAGNEGAQWLSPSGEFAFGFHQLENNSLFLLAIRYQNIPHASFIWYANGDNLAPKGSKLELSKNSGLVLKTPQGVELWTSQLISGTISYGLMNDTGNFQLLDENSQMLWDTFSNPTDTLVPTQIMEVRGTLSSRQKETNFSRGRFQFRLLPDGNAVLNPINLPTNRTYEAHYHSNTYDQNNATNSGFRVMFDNSGLATINFDGTFTISRYPKSGASNPSWTVIKTLPDNICMDLEGKTGGSGVCGFNSICTLEADQRPKCNCPEGYSLLDSTDEYGSCRPNLELGCGGSGQRLQEDMYFMKEMASTDWPQSDYELYEPYNSEDCKNSCLHDCLCAVSVFRDDSCWKKKLPLSNGRRDGEVGGSAFIKLRKNDAVLGSPSNPFIKEKENVKDQDTLITVISVLLGGSVFVNLGVVSAVCIGFHFCYKKRSSTNNTVAESNLRSFTFREIVQATYNFKEELGRGSCGIVFKGTTQSATIAVKKLDKVLKDSDKEFKTEVNVIGQTHHKNLVRLIGYCDEVEHRILVYEFLSNGTLANFLFGDFKPNWNQRVHIAFGISRGLVYLHEECCTQIIHCDIKPQNILLDEHYNARISDFGLSKLLMINQSRTETGIRGTKGYVAPDWFRSAPITAKVDVYSFGVLLLEIICCRRNVDDQFGFEEKGILTDWAYDCYRAGRIDILVENDNEAINDINRLERFVMVAVWCLQEDPSLRPTMKKVMLMLEGIAPVTIPPSPYPYTSVAVSCG	758

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu7g02639	758	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1	3	128	-	-
	Lapu7g02639	758	SUPERFAMILY	alpha-D-mannose-specific plant lectins	53	177	IPR036426	-
	Lapu7g02639	758	FunFam	S-receptor-like serine/threonine-protein kinase	439	542	-	-
	Lapu7g02639	758	Pfam	D-mannose binding lectin	59	143	IPR001480	-
	Lapu7g02639	758	Gene3D	Transferase(Phosphotransferase) domain 1	543	742	-	-
	Lapu7g02639	758	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	585	597	IPR008271	GO:0004672\|GO:0006468
	Lapu7g02639	758	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	15	747	-	-
	Lapu7g02639	758	Gene3D	Phosphorylase Kinase; domain 1	433	542	-	-
	Lapu7g02639	758	Pfam	Protein kinase domain	468	732	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu7g02639	758	Gene3D	-	12	129	IPR036426	-
	Lapu7g02639	758	SMART	serkin_6	468	742	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu7g02639	758	SMART	blect_4	15	130	IPR001480	-
	Lapu7g02639	758	PIRSF	SRK	1	756	IPR024171	GO:0004674
	Lapu7g02639	758	ProSiteProfiles	Protein kinase domain profile.	468	751	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu7g02639	758	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	543	742	-	-
	Lapu7g02639	758	SUPERFAMILY	Protein kinase-like (PK-like)	451	736	IPR011009	-
	Lapu7g02639	758	CDD	PAN_AP_plant	299	383	-	-
	Lapu7g02639	758	ProSiteProfiles	Bulb-type lectin domain profile.	1	128	IPR001480	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu7g02639	Lapu-Chr7	42600681	42603037	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu7g02639	398	739	Receptor kinase-like Gene Family	AT5G45780	37.222	4.47e-68	233

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Lapu7g02639		Pkinase	3.7e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu7g02639	-		-	vra:106771503	1354.73