Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02637 ATGGGCAAAAGCATAGCCCGTGTTTGTGTAGAAGATGAGAAGGGAACAGCAAGAGGGATGCCGAGCTTCAATTCACAATTGCCCAATTCCAATGCATGCTATACAGAGGGAAGCACAGTTGATTCTTTTCGTGTGTCCGACTTTGATCAATCAGTTGGATATCGCATAGAGGATGCTGTTGCCTTGAGTGGAAACTCAATTTTTGACTCACTTAAAGTAAGTAGCCAAACAATTTCTCGAGATCCTGTTCAACCTGATTCCTTTGATAAGTTGCCAATTTCACTTGATAAAAGCCCATTGACAAACCAAACAGAGCGACAAAGTTTGCAATTCCAAAAGGTTCACTCATCCAACTTGGTCACTACAGAACACCAGGAAGAGTTTGCCATGGCTGATGCTAGTCCTAGAACTGATATTTCTACGGATGCTGACACTGACGATAAGAATCCACAGTTTGATAGAAGTCAGGCCCTTGCTGCTGTGGCTTCTGACTCCAGTGACAGATCAAAGGATAAAACAGATCAGAAGACCCTCCGCAGGCTTGCTCAGAATCGTGAGGCTGCAAGAAAAAGTCGATTGAGAAAGAAAGCTTATGTTCAACAGCTGGAAAGTAGCCGTTTAAAGTTGACCCAACTAGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGAGTCTTTATATCAAGTTCAGGTGATCAAGCGCATTCAATGAGTGGAAACGGTGCTATGGCATTTGATGTAGAATATGCAAGGTGGCTGGAAGAGCAGAATCGACAAATTAATGAGCTAAGAGCAGCTGTAAATTCTCACGCAGGTGATACAGAACTTTGCATGATTATCGATGGTGTAATGGCACATTATGATGAGATATTTAAGCTGAAGGCCAATGCAGCTAAGGCTGATGTCTTCCATTTGTTGTCTGGCATGTGGAAAACACCAGCTGAGAGGTGTTTCCTATGGCTTGGTGGTTTTCGGTCATCTGAACTCCTCAAGCTCCTGGTAAATCAGTTGGAACCTCTGACGGAGCAGCAGTTAGTGGGTATCACCAACTTGCAGCAATCTTCCCAACAGGCAGAAGATGCATTGTCTCAGGGCATGGAAGCATTGCAGCAGTCCCTTTCGGAGACATTATCCACTGGATCACTTGGCTCCTCTGGTTCATCAGGGAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAATTAGGGACACTTGAGGGGTTCATTAAGCAGGCTGACAATTTGAGGCAGCAAACACTGCAACAAATTCATCGCATATTGACAACTAGGCAATCGGCTCGTGCACTGCTTGCAATAAATGACTACTTTTCTAGACTGCGTGCTCTTAGCTCTCTTTGGCTTGCACGCCCAAGAGACTGA 1386 0.4502 MGKSIARVCVEDEKGTARGMPSFNSQLPNSNACYTEGSTVDSFRVSDFDQSVGYRIEDAVALSGNSIFDSLKVSSQTISRDPVQPDSFDKLPISLDKSPLTNQTERQSLQFQKVHSSNLVTTEHQEEFAMADASPRTDISTDADTDDKNPQFDRSQALAAVASDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGVFISSSGDQAHSMSGNGAMAFDVEYARWLEEQNRQINELRAAVNSHAGDTELCMIIDGVMAHYDEIFKLKANAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLSETLSTGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIKQADNLRQQTLQQIHRILTTRQSARALLAINDYFSRLRALSSLWLARPRD* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02637 461 SMART brlzneu 172 235 IPR004827 GO:0003700|GO:0006355
Lapu7g02637 461 FunFam BZIP family transcription factor 175 224 - -
Lapu7g02637 461 MobiDBLite consensus disorder prediction 75 105 - -
Lapu7g02637 461 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 179 194 IPR004827 GO:0003700|GO:0006355
Lapu7g02637 461 Pfam bZIP transcription factor 176 216 IPR004827 GO:0003700|GO:0006355
Lapu7g02637 461 Coils Coil 195 222 - -
Lapu7g02637 461 Coils Coil 252 272 - -
Lapu7g02637 461 Gene3D - 175 224 - -
Lapu7g02637 461 PANTHER TRANSCRIPTION FACTOR TGA9 111 460 - -
Lapu7g02637 461 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 174 218 IPR004827 GO:0003700|GO:0006355
Lapu7g02637 461 MobiDBLite consensus disorder prediction 127 178 - -
Lapu7g02637 461 ProSiteProfiles DOG1 domain profile. 241 458 IPR025422 GO:0006351|GO:0043565
Lapu7g02637 461 SUPERFAMILY Leucine zipper domain 176 219 IPR046347 GO:0003700|GO:0006355
Lapu7g02637 461 CDD bZIP_HBP1b-like 176 228 - -
Lapu7g02637 461 Pfam Seed dormancy control 258 333 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02637 Lapu-Chr7 42583599 42594488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02637 130 461 bZIP Transcription Factor Family AT3G12250 79.819 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu7g02637 DOG1 2.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02637 K14431 - gmx:100816123 724.931