Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02624 ATGGGTGCCCTAATGCCGCTGAAAAGTGAAGGGCAAAGAGGTTTTGAGGGCTCACTTTTCAGTGGTGGCGAAAACTCTAGAAGTTCCCATTTCTCGCGGTCACAGCCAGACACCGAGGTCGATAGAAGCATCACCCTTTGTGCAACTCCATTGAGTGTTTGCTTTCCCCACCAAAGCATTTATGAGAGGCTGAAGACGAGAGACGACGGCAACAACGTGGGTGTGGGTGAAGCAGTTGAGAATGATGAGAGCGAGTACGATGGTCAGATGCACAGCAATCCGTACAAGAAGAATGGGCCGTACACGTGTCCGAAGTGCCAGTGTGTGTTTGAGACGTCGCAACGGTTTGCGGCGCACGTGAGTTCGAGACACTACAGGTACGAGACGAAGAGTGAGAGGAAGCAGAGAATGATGGCAAAAATCCGAAGGAGGAGTCTGCGACTTGAATGGGAAAATGGTGCACTCACCGTTGTTGCAGATGATGGTCCCAGGAGTGGTAGCAGTGGTTTTGGTTTTGCAGGAAACAATGGCAACAACGTTGTCACTCCTCCTGCTCCTGCTGCGGTGAAGATTGAAGCTGAGAGTGGTGTGGGGCTGCAGCTTGCTCCTCCGCCTGGGTGGCCAAAGATAACTGCTGCTACACCACAAGATGCTGGAGCTGTCAAAATAAAATTGGAGCCATTAGACCATTAG 693 0.5137 MGALMPLKSEGQRGFEGSLFSGGENSRSSHFSRSQPDTEVDRSITLCATPLSVCFPHQSIYERLKTRDDGNNVGVGEAVENDESEYDGQMHSNPYKKNGPYTCPKCQCVFETSQRFAAHVSSRHYRYETKSERKQRMMAKIRRRSLRLEWENGALTVVADDGPRSGSSGFGFAGNNGNNVVTPPAPAAVKIEAESGVGLQLAPPPGWPKITAATPQDAGAVKIKLEPLDH* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02624 230 MobiDBLite consensus disorder prediction 19 39 - -
Lapu7g02624 230 ProSitePatterns Zinc finger C2H2 type domain signature. 103 124 IPR013087 -
Lapu7g02624 230 MobiDBLite consensus disorder prediction 72 96 - -
Lapu7g02624 230 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02624 Lapu-Chr7 42490262 42491251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02624 73 162 C2H2 Transcription Factor Family AT2G18490 48.913 1.22e-22 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lapu7g02624 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02624 - - vun:114189574 310.071