Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02623 ATGGCCATGAACTCTCCCAAGTCCAACAACTTTGGCACCACCCTCTTTCCTCTCTCCGGTTCGAACACCATCCCAAAAAATGATGGGATGAGCCAAGTTGGGTTGAACCAAAGGGGCAAAGAGGTTTTGAGGGCTCACTTTTCAGGTCTTTCACCAACTAATTCATTAGGTGATATTGGCGACACTACTGAGAGCATCTTAAGAGCGAGTCAGATCGTAAGAGCCAAACTGGAGCATGCAGTTTGCAATGCTGTTGCTGAGACTCAGAGTGAGGAGAATAACAAAAAATTCATGGAGATGCTGCAAGCCAAACTCCTCTCCGCCTCAGCATTCGCTTCTAAAAGTGATGCTGTTGGTGGCACTTCGTCAACACAACTCTCCATTATTGCACCATCCCAAAGGGGAAGTTTTCTGAACCATTTTGCTTATCCCATCCCCAACAGTGGTGGCGAAAACTCTAGAAGTTCCCATTTCTCGCGGTCACAGCCAGACACCGAGGTCGATAGAAGCATCACCCTTTGTGCAACTCCATTGAGTGTTTGCTTTCCCCACCAAAGCATTTATGAGAGGCTGAAGACGAGAGACGACGGCAACAACGTGGGTGTGGGTGAAGCAGTTGAGAATGATGAGAGCGAGTACGATGGTCAGATGCACAGCAATCCGTACAAGAAGAATGGGCCGTACACGTGTCCGAAGTGCCAGTGTGTGTTTGAGACGTCGCAACGGTTTGCGGCGCACGTGAGTTCGAGACACTACAGGTACGAGACGAAGAGTGAGAGGAAGCAGAGAATGATGGCAAAAATCCGAAGGAGGAGTCTGCGACTTGAATGGGAAAATGGTGCACTCACCGTTGTTGCAGATGATGGTCCCAGGAGTGGTAGCAGTGGTTTTGGTTTTGCAGGAAACAATGGCAACAACGTTGTCACTCCTCCTGCTCCTGCTGCGGTGAAGATTGAAGCTGAGAGTGGTGTGGGGCTGCAGCTTGCTCCTCCGCCTGGGTGGCCAAAGATAACTGCTGCTACACCACAAGATGCTGGAGCTGTCAAAATAAAATTGGAGCCATTAGACCATTAG 1074 0.4953 MAMNSPKSNNFGTTLFPLSGSNTIPKNDGMSQVGLNQRGKEVLRAHFSGLSPTNSLGDIGDTTESILRASQIVRAKLEHAVCNAVAETQSEENNKKFMEMLQAKLLSASAFASKSDAVGGTSSTQLSIIAPSQRGSFLNHFAYPIPNSGGENSRSSHFSRSQPDTEVDRSITLCATPLSVCFPHQSIYERLKTRDDGNNVGVGEAVENDESEYDGQMHSNPYKKNGPYTCPKCQCVFETSQRFAAHVSSRHYRYETKSERKQRMMAKIRRRSLRLEWENGALTVVADDGPRSGSSGFGFAGNNGNNVVTPPAPAAVKIEAESGVGLQLAPPPGWPKITAATPQDAGAVKIKLEPLDH* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02623 357 ProSitePatterns Zinc finger C2H2 type domain signature. 230 251 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02623 Lapu-Chr7 42474631 42475791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02623 200 289 C2H2 Transcription Factor Family AT2G18490 48.913 4.97e-22 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lapu7g02623 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02623 - - vun:114189574 474.167