Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02616 ATGGTATCAGCTACAATTAGGCGAATTGTCTCACCCTGTTGGAGACCATCTGATACGGGTGAAATTTCTGGTAGGCACGGAGATTCAAGTGGTCGTGTTGATGGTTTGCTGTGGTACAAAGATTCCGGAAGACATGCACACGGGGAATTCTCAATGGCAGTTATTCAAGCAAACAAATTGTTGGAGGATCAAAGCCAACTTGAATCTGGCCCCTTGAGCTTAAGTGAGGGAAATCCTCTCGGAACTTTTGTTGGTATATACGATGGCCATGGAGGTCCAGAAGCTTCCCGGTTTGTCAATGACAGTCTATTTAAAAATATCAGGAAATTTTCTTCAGAAAATGATGGAATGTCAGCTGATGTTGTCCATAAAGCATTCTTGGCAACTGAAGAAGAATTTCTTTCTCTGGTAGAGAAGCAATGGCTGCACAAGCCGCCTCTAGCGTCAGTTGGATCTTGCTGTTTGATAGGCATAATATGCTGTGGGGAGCTCTATATCGCAAATGCAGGAGATTCTCGAGCAGTATTAGGTAGACTGGATGAGGCTACAAAAGAGATTAGAGCTATTCAACTCTCCGAGGAGCACAATGCTAGCATGGTATCTGTCAGAGAAGAGTTACGCTCATTGCATCCTGATGATCCGCAGATAGTGGTTATGAAGCACCAGGTCTGGCGCGTGAAGGGTCTGATTCAGATTTCAAGATCCATTGGTGATGCATATTTAAAGAAGGTAGAGTTTAATAGAGCACCATTATTGTCAAAATTTCGACTCCCAGAACCCTTTGAGCAGCCAATCCTTAAAGCTGAACCAGCAATATTGGTACAGAAATTGTGTCCTCAAGATCAGTTTCTCATATTTGCATCAGATGGGTTATGGGAGCATCTGAGCAGTCAAGAAGCAGTTGACATTGTCCAAAGCTGTCCACGTAATATTATTGTGATACAGGGAGTGGCAAAGAAACTTGTGAAAACAGCACTTTGTGAAGCTGCAAAGAAAAGAGAAACGAGATACTCAGACTTGAAAAAGATTGACCGAGGGGTGAGGAGACATTTCCATGATGACATCACGGTTATAGTTTTGTATCTTGATTCAAATTTTTTGACCCGTGCCAATTCTCGTGTACCCTTGGTTTCTATCAAAGGAGGTGGTGATAGTGGTTATGGTATTGGAATTATAGATGCCTAG 1185 0.427 MVSATIRRIVSPCWRPSDTGEISGRHGDSSGRVDGLLWYKDSGRHAHGEFSMAVIQANKLLEDQSQLESGPLSLSEGNPLGTFVGIYDGHGGPEASRFVNDSLFKNIRKFSSENDGMSADVVHKAFLATEEEFLSLVEKQWLHKPPLASVGSCCLIGIICCGELYIANAGDSRAVLGRLDEATKEIRAIQLSEEHNASMVSVREELRSLHPDDPQIVVMKHQVWRVKGLIQISRSIGDAYLKKVEFNRAPLLSKFRLPEPFEQPILKAEPAILVQKLCPQDQFLIFASDGLWEHLSSQEAVDIVQSCPRNIIVIQGVAKKLVKTALCEAAKKRETRYSDLKKIDRGVRRHFHDDITVIVLYLDSNFLTRANSRVPLVSIKGGGDSGYGIGIIDA* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02616 394 CDD PP2Cc 50 362 IPR001932 -
Lapu7g02616 394 Gene3D - 38 372 IPR036457 -
Lapu7g02616 394 PANTHER PROTEIN PHOSPHATASE 39 360 IPR015655 GO:0004722|GO:0006470
Lapu7g02616 394 FunFam Phosphatase 2C family protein 38 372 - -
Lapu7g02616 394 SMART PP2C_4 41 360 IPR001932 -
Lapu7g02616 394 SUPERFAMILY PP2C-like 58 363 IPR036457 -
Lapu7g02616 394 Pfam Protein phosphatase 2C 70 330 IPR001932 -
Lapu7g02616 394 ProSiteProfiles PPM-type phosphatase domain profile. 46 362 IPR001932 -
Lapu7g02616 394 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02616 Lapu-Chr7 42359717 42364630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02616 3 384 PP2C-type Phosphatase Gene Family AT3G12620 73.107 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02616 K01102 - gmx:100807559 650.588