Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02588 ATGATCTCAAACACAGACCCTGTAGAACCACTCACTGCGGCAGCGGCCGCGGCCACCTCCGCCGTCGCAATAACCGCTTCTTCTTCCCTTGAAGCTCAGCCTACACCGCCGGCGACACCAAACATCGTGATGTCCTCCAAGGATCACGATTCTCTCTTCAGCGGTGGCGGCATCAGATTATTTTTGTCTAGCTTTCTCTCTGGAAGTCGAAATGGAAGGTTTAGCTATGGATATTCCAGTTTCAAGGGTAAGAGGTCATCAATGGAGGATTTCTTTGAGACCAGAATATCAGAGGTTGATGGTCAGATGGTTGCGTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCCCGGACTGCAGAATATCTGAAAAATAATCTTTTTAAGAATTTGAGTAGCCATCCTGACTTTATCAAAGACACAAAGACTGCTATAGTAGAAGCATTTAAACAGACAGATATTGACTACCTCAATGAGGAAAAGGGGCATCAAAGAGATGCTGGGTCAACTGCATCAACAGCTATGTTGTTGGGGGACCGAATTGTTGTTGCAAATGTTGGTGATTCCAGAGTAGTTGCAAGTAGAGCTGGTTCAGCTGTTCCTTTGTCTATTGATCACAAACCTGATAGATCTGATGAACGTCAAAGGATTGAAAAGGCTGGGGGATTTATAATCTGGGCTGGAACATGGAGGGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGCGACAAACTTCTTAAGCCGTATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGACGGTGTAGATTTTATTATAATTGCTAGTGATGGCCTTTGGAATGTCATATCAAACAAGGAGGCCGTGTCTTTAGTACAAAATATCACAGATGCAGAAGTGGCATCCAGAGAACTTATAAAAGAAGCTTATGCTCGGGGAAGCTCAGATAACATCACTTGTGTTGTTGTTCGATTTGATCTACCCTGA 972 0.4414 MISNTDPVEPLTAAAAAATSAVAITASSSLEAQPTPPATPNIVMSSKDHDSLFSGGGIRLFLSSFLSGSRNGRFSYGYSSFKGKRSSMEDFFETRISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDIDYLNEEKGHQRDAGSTASTAMLLGDRIVVANVGDSRVVASRAGSAVPLSIDHKPDRSDERQRIEKAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLP* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02588 323 PANTHER PROTEIN PHOSPHATASE 50 320 IPR015655 GO:0004722|GO:0006470
Lapu7g02588 323 Pfam Protein phosphatase 2C 76 313 IPR001932 -
Lapu7g02588 323 ProSiteProfiles PPM-type phosphatase domain profile. 75 320 IPR001932 -
Lapu7g02588 323 Gene3D - 68 322 IPR036457 -
Lapu7g02588 323 SUPERFAMILY PP2C-like 65 321 IPR036457 -
Lapu7g02588 323 CDD PP2Cc 74 320 IPR001932 -
Lapu7g02588 323 SMART PP2C_4 64 318 IPR001932 -
Lapu7g02588 323 ProSitePatterns PPM-type phosphatase domain signature. 106 114 IPR000222 GO:0043169
Lapu7g02588 323 FunFam probable protein phosphatase 2C 59 67 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02588 Lapu-Chr7 42098841 42104992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02588 42 322 PP2C-type Phosphatase Gene Family AT1G43900 73.665 2.51e-156 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02588 K17506 - gmx:100776867 545.814