Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02547 ATGGTGAACGTGGTGGAATTGCAGAAACAGCTGCAGAGGTGGCAGCAGAATGGGAATAACGTCAATGTCGATGCCAACGGAGAACTCATGTACGTCAAAGTCATGACTGATGAGCAGTTGGAAACTCTGAGGAAACAAATTGCTGTCTATGGTACCATTTGTGACCAACTTATTGAGATGCACAGAACACTCTCAGCTCAACAGGATCTTGCAGGGGTTAGATTGGGAAACCTGTACTGTGATCCATTAATGACATCTGGTGGACACAAAATAACATCCAGACAAAGGTGGACACCTACACCTGTGCAGCTTCAGATTCTTGAACGTATATTTGATCAGGGAAATGGAACTCCAAGCAAGGAAAAAATCAAGGAGATCACTGCTGAACTGGGCCAGCATGGTCAAATTTCTGAAACAAATGTGTATAATTGGTTTCAGAACAGGCGTGCTCGATCCAAAAGAAAACTGCAAAATGTGGCTCCTAGCAACACTGAATCCGAAGTGGACACTGAGGTTGATTCTAAGGATAAGAAGACAAAACCTGAGGAGTTTCAGTCCCAACATAACATAACTTCTGGAGGGGCTGAAAAGTTGTGCTTTCAGAACCCTCAAGTGTACTCTGACTTGCAGTACTTCAACCCTGATTCAAACAAACCGTATTCCATGTTCCCATCAGATGGCAGTTTGAAATCCACAAGAAATTTGAGTCATGTGTCTGTTTTTAACGAGGCGCTGTCAAACTCAAGGAGTGAGTATGTAGGTGGAAAAATGGAAGTTGCTGGAACAGTGAGCTACAATTTATTCCACCAAACAGAAGACTGTAATCTGGGAGTTTGA 837 0.4313 MVNVVELQKQLQRWQQNGNNVNVDANGELMYVKVMTDEQLETLRKQIAVYGTICDQLIEMHRTLSAQQDLAGVRLGNLYCDPLMTSGGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEITAELGQHGQISETNVYNWFQNRRARSKRKLQNVAPSNTESEVDTEVDSKDKKTKPEEFQSQHNITSGGAEKLCFQNPQVYSDLQYFNPDSNKPYSMFPSDGSLKSTRNLSHVSVFNEALSNSRSEYVGGKMEVAGTVSYNLFHQTEDCNLGV* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02547 278 Gene3D - 96 160 - -
Lapu7g02547 278 PANTHER WUSCHEL-RELATED HOMEOBOX 13 15 272 IPR044559 GO:0003700
Lapu7g02547 278 SMART HOX_1 92 159 IPR001356 GO:0003677
Lapu7g02547 278 ProSiteProfiles 'Homeobox' domain profile. 90 155 IPR001356 GO:0003677
Lapu7g02547 278 MobiDBLite consensus disorder prediction 168 184 - -
Lapu7g02547 278 Pfam Homeodomain 94 154 IPR001356 GO:0003677
Lapu7g02547 278 MobiDBLite consensus disorder prediction 153 188 - -
Lapu7g02547 278 CDD homeodomain 94 155 IPR001356 GO:0003677
Lapu7g02547 278 SUPERFAMILY Homeodomain-like 92 156 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02547 Lapu-Chr7 41782665 41785283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02547 30 276 Wox Gene Family AT4G35550 52.256 8.38e-83 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lapu7g02547 Homeodomain 8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02547 - - pvu:PHAVU_007G011600g 508.449