Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02538 ATGTCTCAGACATCCAGTGTCCTGCCTGCTTTCCACTCCATCAAGTCATTGCCCCCCGAGTTCAAGTTTGCCAACAATCCCAACCCTCTGCTTGTGGAAAAACATGGAGATGTTAAATTTAGACGCACCAATCCGATTGGATCAAATGGTCTTGAGAATGGTGCACTAGTAGGGGAGGTTTCTAAGGAAGTTCGAGGCCGAGCTGGTGGCATGGATCTTTTCGACGAGGATTCACCTTATGGTGGAAAAGGTAGATCATTAAAATACCGACCATCTAATGCAGATGAAGACTCAGTATCCGTTTCGTTGCCCCTGCCATCAATTTTGGCATCTTCTAGGGAAAACAGGTGGAACGATACAAATACTTATGGTTCAAAAAAGAAGGTTCAGTCCTGGCTTCAACTACCAAATGGGGATTGGGAGCTGGTAAAGATAATAACTACTTCTGGAGCTGAATCTGTCATTTCACAGCCTGATGGGAAAGTTTTGAAGGTGAAAGAGGATAATTTGGTGCCAGCTAATCCCGACATTCTTGATGGAGTGGATGACCTCATGCAACTTAGTTATTTAAATGAACCAGCAGTTTTATTCAACCTGCAATATAGATATAACCATGATATGATCTATACAAAAGCCGGGCCTATTTTGGTCGCCGTAAATCCCTTTAAGAAAGTTCCTTTGTATGGTAATGACTATATTGAAGGCTACAAGTGTAAGGCAATTGAAAGCCCTCATGTATATGCAATTACTGACACAGCCATCCGAGAAATGATACGAGATGAAGTGAATCAATCCATAATTATAAGTGGAGAGAGTGGAGCGGGGAAGACTGAGACAGCAAAAATAGCAATGCAATACTTGGCTGCCCTTGGTGGCGGAAGTGGAATAGAGAATGAAATATTAAAGACTAATCCAATACTAGAAGCCTTTGGTAATGGAAAAACATTAAGAAATGACAACTCGAGTCGTTTTGGAAAGCTCATTGAGATTCATTTCAGTGAAACTGGAAAAATATCTGGTGCAAATATTCAAACATGTATGTTTACACTGGATTCCAGAGTAGTCCAATGCAATGAAGGGGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGAGCACCCTCATCTCTTAGGGAAAAGCTAAATCTACTAAGTGCGGAAGACTATAAATATCTGAGGCAGAGCAATTGTTATTCAATTAGCGGCGTAGATGATGCTGAAGAATTTCGCATAGTCAAGGAAGCTCTGGATATTGTCCACATTAGCAAGGGAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTATTATGGTTAGGGAACATATCATTTACTGTGGTCGATAATGAAAATCATGTTGAAGCTGTTGAGGATGAGGGTCTGTTCACCGTTGCCAAGTTGATTGGCTGTGAAATTGAAGACCTGAAGTCGACTTTTTCAACTCGCAAAATGAAAGTTGGTAATGATAATATTGTCCAGAAGTTGACGCTCTCTCAGGCTATTGACGCGAGAGATGCTTTGGCGAAGTCAATATATGCATGTCTGTTTGATTGGTTGGTTGAGCAAATAAATAAATCCCTTGCTGTTGGCAAAAGACGAACTGGGAGATCAATCAGCATTCTTGATATTTATGGCTTTGAGTCATTCAATAGGAACAGTTTTGAGCAGTTTTGCATAAATTATGCAAATGAAAGATTACAGCAACATTTCAATCGTCATTTATTCAAGCTGGAACAGGAGGAATATATCCAAGATGGGATTGATTGGGCTAAAGTGGAATTTGAAGACAACCAAGATTGCCTTAATCTTTTTGAGAAGAAACCTCTGGGACTACTATCCCTGTTAGATGAAGAGTCAACTTTCCCTAATGGTACAGATTTAACGTTTGCTAACAAGCTTAAGCAGCATTTGAATTCCAATTCATGCTTCAAAGGAGAACGTGAAAAAGCCTTTACAGTGCGTCATTACGCAGGGGAGGTCACTTATGATACATCTGGATTCCTGGAAAAGAACAGAGACCTATTGCACTTAGATTCTATCCAACTTCTATCTTCAAGCAAATGCCATCTTCCTAAGTTATTTGCAACCCATATGCTTACTCAGTCTGAGAAGCCTGTTGTAGGTCCCTTACATAAGTCGGGTGGGGCAGATTCCCAAAAGCTAAGTGTTGCCACAAAATTCAAGGGACAATTGTTCCAATTGATGCAACGTCTAGAGAGTACTACACCACATTTTATACGCTGCATTAAGCCTAATAACCTCCAATCACCTGGATCATATGAGCAAAGCCTTGTACTGCAGCAGTTGAGATGTTGTGGGGTTCTGGAAGTTGTTCGAATATCAAGATCCGGCTTTCCTACAAGAGTGTCTCACCAAAAGTTTGCCAGAAGATATGGTTTTCTTCTCCTTGAAAATGTTGCCTCTCAGGATCCACTTAGTGTCTCAGTTGCTATTCTTCATCAGTTCAACATTTTGCCTGAGATGTTTCAAGTTGGCTACACAAAGCTATTCTTCCGAACAGGGCAGATTGGAGTGCTTGAGGATACCAGAAATCGTACTCTGCATGGAATTTTACGTGTGCAAAGTTGCTTCAGGGGTCACCGAGCTCGTTGTTACCGCAAGGAACTTTGGAGAGGAATCACCACTCTCCAATCATTTATTAGAGGAGAGAAAAGCAGAAAGGAATATGCAGCTTTGCTTCATAGACATAGGGCTGCTGTTATTATACAGAAGCGGATGAAAACTGTATTTGCAAGGAACAGGTTGAAAAGTATTAACGAAGCTGCTGTTGTCATACAATCATTTATCCGTGGTTGGTTAGTCAGAAGATGCTCCGGAAACATAGGATTATCAAAATCTGGAGTTACGAAGACTAACGAATCAGATGAGGTTCTGGTGAAGTCGTCTTTCCTCGCTGAACTACAGCGCCGGGTACTTAAGGCAGAAGCTGCCCTGAGAGAGAAAGAAGAGGAAAATGACATTCTTCACCAACGCCTTCAACAGTATGACAGCAGATGGTCCGAATATGAATTAAAGATGAAGTCCATGGAAGAAGTGTGGCAGAAGCAAATGAGATCCCTACAATCTAGCCTCTCTATTGCAAAGAAGAGCCTTGCTATGGATGATTCTGAAAGAAATTCAGATGCTTCTGTTAATGCAAGTGATGAGAGGGATTTCAGCTGGGATGTAGGAACCAATCACCGGCGCCAAGAAAGCAACGGGGCAAGATCAATGAGTGCCGGTTTGAGTGTTATAAGTCGGTTGGCTGAAGAATTTGAGCAGAGGAGTCAAGTGTTTGGTGATGATGCCAAGTTCTTGGTAGAGGTAAAATCTGGTCAAGTTGAAGCAAGTTTGAACCCAGATAGAGAACTTAGAAGGTTAAAACAGATGTTTGAAGCTTGGAAAAAGGATTATGGTGCAAGACTACGTGAAACAAAGGTAATTTTACATAAACTTGGAAGTGAAGATGGATCAATTGAGAAAGTGAAGAAAAGTTGGTGGGGAAGAAGGAATAGTACCAGAATAAGTTGA 3534 0.4117 MSQTSSVLPAFHSIKSLPPEFKFANNPNPLLVEKHGDVKFRRTNPIGSNGLENGALVGEVSKEVRGRAGGMDLFDEDSPYGGKGRSLKYRPSNADEDSVSVSLPLPSILASSRENRWNDTNTYGSKKKVQSWLQLPNGDWELVKIITTSGAESVISQPDGKVLKVKEDNLVPANPDILDGVDDLMQLSYLNEPAVLFNLQYRYNHDMIYTKAGPILVAVNPFKKVPLYGNDYIEGYKCKAIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIENEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSETGKISGANIQTCMFTLDSRVVQCNEGERSYHIFYQLCAGAPSSLREKLNLLSAEDYKYLRQSNCYSISGVDDAEEFRIVKEALDIVHISKGDQENVFAMLAAVLWLGNISFTVVDNENHVEAVEDEGLFTVAKLIGCEIEDLKSTFSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGEREKAFTVRHYAGEVTYDTSGFLEKNRDLLHLDSIQLLSSSKCHLPKLFATHMLTQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPGSYEQSLVLQQLRCCGVLEVVRISRSGFPTRVSHQKFARRYGFLLLENVASQDPLSVSVAILHQFNILPEMFQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGHRARCYRKELWRGITTLQSFIRGEKSRKEYAALLHRHRAAVIIQKRMKTVFARNRLKSINEAAVVIQSFIRGWLVRRCSGNIGLSKSGVTKTNESDEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYDSRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSERNSDASVNASDERDFSWDVGTNHRRQESNGARSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDRELRRLKQMFEAWKKDYGARLRETKVILHKLGSEDGSIEKVKKSWWGRRNSTRIS* 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02538 1177 Gene3D - 856 904 - -
Lapu7g02538 1177 Gene3D - 905 947 - -
Lapu7g02538 1177 CDD MYSc_Myo8 193 840 IPR036022 -
Lapu7g02538 1177 ProSiteProfiles Myosin motor domain profile. 179 852 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g02538 1177 Gene3D - 786 850 - -
Lapu7g02538 1177 PANTHER MYOSIN 172 1169 - -
Lapu7g02538 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 900 IPR027417 -
Lapu7g02538 1177 FunFam Unconventional myosin-XIX 550 742 - -
Lapu7g02538 1177 PRINTS Myosin heavy chain signature 209 228 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g02538 1177 PRINTS Myosin heavy chain signature 538 566 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g02538 1177 PRINTS Myosin heavy chain signature 591 619 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g02538 1177 PRINTS Myosin heavy chain signature 305 332 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g02538 1177 PRINTS Myosin heavy chain signature 263 288 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g02538 1177 Gene3D Kinesin motor domain 182 781 IPR036961 -
Lapu7g02538 1177 FunFam Myosin heavy chain 362 418 - -
Lapu7g02538 1177 ProSiteProfiles IQ motif profile. 926 955 IPR000048 GO:0005515
Lapu7g02538 1177 Pfam Myosin head (motor domain) 181 840 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g02538 1177 ProSiteProfiles IQ motif profile. 879 906 IPR000048 GO:0005515
Lapu7g02538 1177 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 126 175 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lapu7g02538 1177 Gene3D Myosin VI head, motor domain, U50 subdomain 423 720 - -
Lapu7g02538 1177 SMART MYSc_2a 173 853 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g02538 1177 Pfam IQ calmodulin-binding motif 880 897 IPR000048 GO:0005515
Lapu7g02538 1177 Pfam IQ calmodulin-binding motif 928 944 IPR000048 GO:0005515
Lapu7g02538 1177 Pfam IQ calmodulin-binding motif 858 873 IPR000048 GO:0005515
Lapu7g02538 1177 SMART iq_5 876 898 IPR000048 GO:0005515
Lapu7g02538 1177 SMART iq_5 925 947 IPR000048 GO:0005515
Lapu7g02538 1177 SMART iq_5 902 924 IPR000048 GO:0005515
Lapu7g02538 1177 SMART iq_5 853 875 IPR000048 GO:0005515
Lapu7g02538 1177 ProSiteProfiles IQ motif profile. 856 883 IPR000048 GO:0005515
Lapu7g02538 1177 Coils Coil 972 1006 - -
Lapu7g02538 1177 Gene3D - 362 421 - -
Lapu7g02538 1177 Gene3D - 548 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02538 Lapu-Chr7 41718019 41729758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02538 7 1175 Myosins gene family AT1G50360 75.639 0.0 1788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02538 - K10357 gmx:100801124 2195.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02538 7 41718019 41729758 Lapu7g02538 7 41718019 41729758 ECH