Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02532 ATGATGTCTTCCGGCGGGGACGTTGGGAAGCTATTTTTCTGCCACGTGTGCAGTCAGAGGATCAGCTGCACCGATGAGTCGGAACCGTTCTGCCCGATCTGTCTGGAAGGTTTCGTGGAAGAATGGGACCCTAATAACTATAATCATAACCCTAACCCTAATTTTATCCATGAGAGTGGGGGAGAATCTTTGGATCCCGAATTCCCGTTCGATTTAATAGACTCCATGCTCCCTCTCTTGCTCAACACCGCTTCCAGGACCCGACGCGAACCCGACATGTTCGACCCGAGGACCTACCTCCAGAACTACCTTCAGAACCTTCGCGCCGACGGTGCTAACATTCAATTCTCCTTTGGCCACCCTTCCGACACGGGGTTCCGAGCCCCGGCCAACTTTGGCGACTACTACCTCGGGCCCGGCTTTGAGCAGTTGATTCAGCTGCTCGCCGACAACGACCCCAACCGTTACGGCACGCCACCCGCCGCCAAGGACGCCGTCGAGAATCTCCCCACAGTCACCGTCGATGACGAGTTGCTGAACTCGGAGATGAACCAATGCGCGGTCTGCCAGGATGAGTTCGAGAAGGGCACGCAGGTGACGCAGATGCCGTGCAAGCACCCGTTTCACGCCGATTGCTTGATTCCCTGGCTCCGGCTGCATAACTCTTGCCCTGTGTGTCGGTATGAGCTGCCCACCGATGATGCGGATTATGAGAATCGGACGCGTAGCAGTGGCGATGATGGTGCGTCGAGGTCTGATGGGAGCGATAGTGGCAGTGGCGCGGGAGGGGCAAATAGTAGACCTGTTCACAGGACTGTTAGAATATATTTGCGGCCTCCTTTTGATGCAGGTGACTCTACGCAGGACAGTGCTGAAAGGGGATGGGAAGGTTGGGATTGA 900 0.5589 MMSSGGDVGKLFFCHVCSQRISCTDESEPFCPICLEGFVEEWDPNNYNHNPNPNFIHESGGESLDPEFPFDLIDSMLPLLLNTASRTRREPDMFDPRTYLQNYLQNLRADGANIQFSFGHPSDTGFRAPANFGDYYLGPGFEQLIQLLADNDPNRYGTPPAAKDAVENLPTVTVDDELLNSEMNQCAVCQDEFEKGTQVTQMPCKHPFHADCLIPWLRLHNSCPVCRYELPTDDADYENRTRSSGDDGASRSDGSDSGSGAGGANSRPVHRTVRIYLRPPFDAGDSTQDSAERGWEGWD* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02532 299 FunFam E3 ubiquitin-protein ligase RING1-like 147 233 - -
Lapu7g02532 299 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 233 IPR013083 -
Lapu7g02532 299 Pfam Ring finger domain 184 227 IPR001841 -
Lapu7g02532 299 SMART ring_2 186 226 IPR001841 -
Lapu7g02532 299 ProSiteProfiles Zinc finger RING-type profile. 186 227 IPR001841 -
Lapu7g02532 299 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 90 231 - -
Lapu7g02532 299 MobiDBLite consensus disorder prediction 235 299 - -
Lapu7g02532 299 MobiDBLite consensus disorder prediction 235 249 - -
Lapu7g02532 299 SUPERFAMILY RING/U-box 165 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02532 Lapu-Chr7 41680387 41683042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02532 97 242 C3H Transcription Factor Family AT5G01980 41.497 5.32e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02532 K11982 - gmx:100785289 416.772