Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02523 ATGGAGAACGACACCGCCGCCGCCGCCGCCGCCGCTAACAATAACGCCGCCACCGCCAAAGTAGGTTCCGGAGGAGTGAAATCGAACAATCATCACCCAGAGGAGGAGCATTCCAATTTGAATGGCGAGGAGCACATGGCAGAGCAAGTGGAGGCGGAAGAGGAAGAAGATCGAGAAGCCGATGTAGGTGAAGGAGAACAAACTGGATCTGCCCCCAACCCTCGCCAACCTTCGCGAACCCCTTTCACTAATCTCAGCCAGGTCGATGCTGACCTCGCTCTCGCTCGAACCCTCCAGGAGCAGGAAAGGGCATATATGATGCTGAGAATGAATAATGAAGGAAGTGATTATGGTAGCTGGGAAGGTGGAAGCTATTTGCATGATGATGGAGATGATTTTGACGATCTACATGATGGAACTGATGTGGATGATGATGATGATGATGATGATGAAGAAGAAGATGATGAGGAGGAGGAGTATGAGGATGAAGATGCATTTGATGTCCATGCTCATGCTAGTTCTGGAGAACACGATAATCCCAGCATTGAATTTGACCCAGATGTTTTTTCAAGCGATGAAGCATATGCAAGAGCATTACAGGAAGCTGAAGAGAGGGAGATGGCAGCTAGATTGCTGGCCCTTGCTGGGATAAATGATCAAGAGGCAGAGGACATAGAGGAACATGGTGCTAATTCTCAGGATGCTTGGGAGGATGTTGATCCAGATGAACTTTCATACGAGGAATTACTGGCCTTGGGTGACGTAGTTGGAACTGAGAGCAGAGGTCTTTCAACTGATACTATTGCTTGTTTGCCTTCAGTCAACTACAAGATTGGGAGTGATCAGCATGGAAGCAATGATTCGTGTGTCATTTGCCGGGTGGACTTTGAGGATGGTGAGTCTTTAACACATCTTTCCTGCAAACATCTGTACCATCCTGAGTGTATCAACAATTGGTTGAAAATAAACAAGAAGCAAGTTCTGAAATATCGTTCTATTAGGTCTTTGGTGTACACCTCTTTGCCTCTGGTTGGATAA 1038 0.4701 MENDTAAAAAAANNNAATAKVGSGGVKSNNHHPEEEHSNLNGEEHMAEQVEAEEEEDREADVGEGEQTGSAPNPRQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWEGGSYLHDDGDDFDDLHDGTDVDDDDDDDDEEEDDEEEEYEDEDAFDVHAHASSGEHDNPSIEFDPDVFSSDEAYARALQEAEEREMAARLLALAGINDQEAEDIEEHGANSQDAWEDVDPDELSYEELLALGDVVGTESRGLSTDTIACLPSVNYKIGSDQHGSNDSCVICRVDFEDGESLTHLSCKHLYHPECINNWLKINKKQVLKYRSIRSLVYTSLPLVG* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02523 345 MobiDBLite consensus disorder prediction 134 164 - -
Lapu7g02523 345 MobiDBLite consensus disorder prediction 8 25 - -
Lapu7g02523 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 254 327 IPR013083 -
Lapu7g02523 345 Pfam Ring finger domain 287 324 IPR001841 -
Lapu7g02523 345 SUPERFAMILY RING/U-box 280 325 - -
Lapu7g02523 345 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 31 326 IPR043312 -
Lapu7g02523 345 MobiDBLite consensus disorder prediction 29 47 - -
Lapu7g02523 345 MobiDBLite consensus disorder prediction 1 87 - -
Lapu7g02523 345 MobiDBLite consensus disorder prediction 69 87 - -
Lapu7g02523 345 MobiDBLite consensus disorder prediction 48 62 - -
Lapu7g02523 345 MobiDBLite consensus disorder prediction 113 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02523 Lapu-Chr7 41620198 41627128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02523 68 233 C3H Transcription Factor Family AT3G19910 52.381 1.67e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02523 K19045 - gmx:100306465 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02523 7 41620198 41627128 Lapu7g02523 7 41620198 41627128 ECH