Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02516 ATGATGGTGACGGAGGGCAACGACAGCTGCGGCAGCGGAGTGCAGCACCACACCACGTCCTCCTCCTCCTCGCCGGCGCAAACCCGTCAGCAGCGCCACAAGGTCGAAGTCTACAATGAGATTCTTCGCCGCTTGAAAGATTCCGGCCACGAAGAGGCTATGCAACCCGGCTTCAACGATCAGCTTTGGGCTCACTTCAATCGCCTTCCTACACGGTACGCTTTGGATGTGAATGTGGAAAGGGCGGCTGATGTTCTTATGCACAAGAGATTATTGCAGCTGGCTCATGATCCTGCCAATAGGCCTTCAATTGAAGTTCGATTAGTTCAGGTTCATCCCATATCTGATGGAAACTCAGCTGACACTTTTGAATTAGATGATCCTGGGACTGAATCTGGTCAAAGTTCTTCAAAGTACTCAAGCAGGCAGAGTATACATCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCATTGGCTCTTGAAGCAAATAGTTCTGAAGGCATAGAAGAGGAACAATCTGTACATGCCAATGTTCAATATTCACGGCCCATGCATGAAATCACCATCTCAACAGATGACAAGCCAAAGCTTCTTAGCCAGTTAACTGCTTTGCTTGCTGAGATAGGACTGAACATCCAAGAAGCACATGCCTTTTCCACAACTGATGGTTACTCATTAGATGTGTTTGTTGTTGAAGGATGGCCCTATGAGGAAACCGAAAAGCTTAAAGCAGCTTTGGAAAGAGAAGTCTTGAAGAAGATTGAGAGACAGGTGAGGTCCAGTCCGCAATCTGTATCTTCTGTTGATGAGCCTGATCAAGCAAAGGTGAAAAGCGAACTGGATCATTTGACAATACCAAATGATGGGACAGATGTTTGGGAAATAGATCCTAAACATTTGAAATATGGAACTCAAATTGCATCTGGTTCATATGGTGAACTATTTAAAGGTGTATACTGTAGCCAGGAAGTAGCCATCAAAGTTCTCAAGCCTGAGCATGTAAATTCAGAATTGCAGAAAGAGTTTGCTCAAGAAGTCTATATCATGAGAAAGGTTCGACACAAGAATGTTGTACAATTCATAGGAGCATGTACCAAACCCCCTCGCCTATGCATAGTAACAGAATTCATGTCTGGTGGAAGTGTGTATGACTATCTACATAAGCAGAGGGGCTTTTTTAAATTTCCTACCCTACTCAAAGTAGCAATTGATATTTCTAAAGGGATGAACTACTTGCACCAACATAACATAATCCATAGAGACTTGAAGGCTGCCAACCTTTTGATGGATGAAAATTATATTGTAAAGGTTGCAGATTTTGGGGTTGCTAGAGTTAAAGCTCAATCTGGTGTTATGACAGCAGAAACCGGAACCTATAGATGGATGGCTCCTGAGGTTATAGAACACAAGCCTTATGATCACAAGGCTGATGTATTTAGTTTTGGAATTGTTTTATGGGAGTTGCTCACTGGAAAGCTTCCATACGAATACTTAACCCCCCTACAGGCAGCTATAGGAGTAGTTCAAAAGGGTTTGCGACCCACCATCCCCAAGAACACTCATCCAAAGTTTGTTGAGCTTCTTGAGAGATCCTGGCAGCAAGATCCAACATTGAGACCAGATTTCTCTGAAATTATCGAGATCCTGCAGCAGTTAGCAAAGGAGGTTGGAGATGGAGAGGAACGGCACAAGGAAAAATCTGGAGGACTTCTGTCAGTTCTCAGACGAGGACATCACTAA 1746 0.4393 MMVTEGNDSCGSGVQHHTTSSSSSPAQTRQQRHKVEVYNEILRRLKDSGHEEAMQPGFNDQLWAHFNRLPTRYALDVNVERAADVLMHKRLLQLAHDPANRPSIEVRLVQVHPISDGNSADTFELDDPGTESGQSSSKYSSRQSIHPPPAFGSSPNLEALALEANSSEGIEEEQSVHANVQYSRPMHEITISTDDKPKLLSQLTALLAEIGLNIQEAHAFSTTDGYSLDVFVVEGWPYEETEKLKAALEREVLKKIERQVRSSPQSVSSVDEPDQAKVKSELDHLTIPNDGTDVWEIDPKHLKYGTQIASGSYGELFKGVYCSQEVAIKVLKPEHVNSELQKEFAQEVYIMRKVRHKNVVQFIGACTKPPRLCIVTEFMSGGSVYDYLHKQRGFFKFPTLLKVAIDISKGMNYLHQHNIIHRDLKAANLLMDENYIVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERSWQQDPTLRPDFSEIIEILQQLAKEVGDGEERHKEKSGGLLSVLRRGHH* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02516 581 ProSiteProfiles Protein kinase domain profile. 302 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02516 581 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 28 557 - -
Lapu7g02516 581 Pfam Protein tyrosine and serine/threonine kinase 302 551 IPR001245 GO:0004672|GO:0006468
Lapu7g02516 581 CDD STKc_MAP3K-like 308 551 - -
Lapu7g02516 581 MobiDBLite consensus disorder prediction 1 33 - -
Lapu7g02516 581 MobiDBLite consensus disorder prediction 8 32 - -
Lapu7g02516 581 FunFam Serine/threonine-protein kinase isoform 1 292 380 - -
Lapu7g02516 581 SUPERFAMILY Protein kinase-like (PK-like) 287 551 IPR011009 -
Lapu7g02516 581 ProSiteProfiles ACT domain profile. 188 269 IPR002912 -
Lapu7g02516 581 Gene3D - 185 259 - -
Lapu7g02516 581 Gene3D Phosphorylase Kinase; domain 1 292 380 - -
Lapu7g02516 581 MobiDBLite consensus disorder prediction 559 581 - -
Lapu7g02516 581 CDD ACT_TyrKc 186 253 - -
Lapu7g02516 581 SUPERFAMILY ACT-like 186 250 IPR045865 -
Lapu7g02516 581 MobiDBLite consensus disorder prediction 117 155 - -
Lapu7g02516 581 Coils Coil 238 258 - -
Lapu7g02516 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Lapu7g02516 581 SMART serkin_6 302 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02516 581 Gene3D Transferase(Phosphotransferase) domain 1 381 572 - -
Lapu7g02516 581 PRINTS Tyrosine kinase catalytic domain signature 413 431 IPR001245 GO:0004672|GO:0006468
Lapu7g02516 581 PRINTS Tyrosine kinase catalytic domain signature 478 500 IPR001245 GO:0004672|GO:0006468
Lapu7g02516 581 PRINTS Tyrosine kinase catalytic domain signature 522 544 IPR001245 GO:0004672|GO:0006468
Lapu7g02516 581 PRINTS Tyrosine kinase catalytic domain signature 459 469 IPR001245 GO:0004672|GO:0006468
Lapu7g02516 581 PRINTS Tyrosine kinase catalytic domain signature 376 389 IPR001245 GO:0004672|GO:0006468
Lapu7g02516 581 FunFam serine/threonine-protein kinase HT1 381 571 - -
Lapu7g02516 581 MobiDBLite consensus disorder prediction 128 150 - -
Lapu7g02516 581 MobiDBLite consensus disorder prediction 559 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02516 Lapu-Chr7 41551394 41563740 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02516 5 580 MAP Kinase Kinase Kinase AT4G35780 64.757 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lapu7g02516 PK_Tyr_Ser-Thr 3.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02516 - - gmx:100805180 1096.26