Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02515 ATGCAATCTATCAGGAAGTCCTTCAAATCTTATGGTTCCTTCAAACAGTCAAAAAGGTTTTCCGGCGCCGGAAACCACGATTCCGACCACGAGCAGCTCCCCATTCTCCTCGACCACGAGCCGCACCGCCACAACGCAATGCCCGCCGGCGACTACGTCGTCAAAATCGACGACGCCGCCAACAACCCCCAGGAGGGCAACAGGATTTGGCGCGAGTCAAGCTACGACTTCTGGAATGGGGAAAGCTCCTCCGCCGCCGCCACCGACCAGAGTTTCGATTTCCGGCAGACGGAGGACCCGCCGTCGCAGCTGATAGGGCGGTTCCTTCACAAGCAACGGGCCTCCGGCGAGATGCAGCTGGACATGGATTTGGAAATGGAGGAGCTCCAGCGCGAAGCCGACGAAGGAAGGTTGACGCCGGTGGAGGAGTCTCCGGTGAACAATCGCACGTCCAGGGAGCTTAAGGTCTCCTTCGATGAACCCCTTTCCAATTCGAATCTCCTCGAAGCGCAGAACGACGTCTTCAGGAGAAGGCACAGCAAAGAATCTTCGACGATCACGGAGTTCCAACGCCCTCCGCAGCCGCCGCATCACGACCGTCGCCGCTCGCCTTCGCCGTCGCCTGCCGCCGATAGCGAGGTCCTCCGGTGCACTTCGAACGCTTCCTTCGAGAGAAACCTCTCCATGCAGAGAAAATCTGCGTTGTTGAAGGCCAAAACGAGATCCAGGTTGATGGACCCGCCAGAGGAACCCGACAGAAGATCGGGTCGGGTTATGAAATCGGGTCAGCTCCTTTCCGGGTTTTTGGGAAAGAAGACTGACGAGGAGGAGGACGATCCGTTTTTGGAAGAGGATCTTCCTGATGAGTTCAAGAAGACTCATTTCAGCTTCTGGATTCTTCTGGAGTGGGTGAGTTTGATTTTGATCATTGGGTTGTTGATAGCCACCCTTTGCATTCCCTTTCTGAGGGAGAAGGATCTGTGGCAACTTAGGTTGTGGAAATGGGAGGTTATGGTTCTGGTCTTGATCTGTGGTAGATTGGTGTCTGATTGGGTTATTAGGATTGCTGTGTTCTGCATTGAGAGGAACTTCCTTTTGAGGAAGAGGGTGTTGTATTTTGTGTACGGTGTGAAGAAGGCGGTTCAGAATTGTGTCTGGTTGGGGCTCGTGTTGATTGCGTGGCATTTGTTGTTTGACAAGAGGGTGCAGAGGGAGACCCACAGTGATTTCCTGGAGTATGTTAACAAGGTGTTGGTGTGTTTCCTTGTGGGGACTTTGGTGTGGTTGCTGAAGACGCTCATGGTTAAGGTGTTGGCCTCTTCTTTCCATGTGAGTACGTACTTTGATAGGATTCAGGAGTCACTGTTTAATCAGTTTGTGATTGAGACGCTTTCGGGGCCTCCTCTGGTGGAGATTCAGAAGGCTGAGGAGGAGGAGGAGAGGCTCGCTGATGAGGTCCAGAAGCTGCAGAATGCAGGGGTTACCATACCCCCTGACCTTAGGGCAACTGCTTTTTCTAATATCAAGAGTGGGAGGTTGAGGAGTGGAGTGCTCCCCAAGAGCCCCAGAGGTAAGAGTGGCAAGTTTTCGCGGCCTCTTTCCAAGAGGTCTGACGATGGTAATGTCATCACCATTGATAACCTGCATAAGCTCAACCCCAACAACGTGTCTGCCTGGAATATGAAAAGGTTGATGAACATGGTCCGGCATGGGGCTCTTACTACCTTGGATGAACAGATAATTAATAGTGCCGCTGACGATGAGAATGCCACGCAAATTAGAAGTGAAAACGAGGCAAAAGCTGCTGCTAAGAAAATATTTCAGAATGTTGCTAGGCGTGGGTGCAGGTATTTATACCCGGATGACTTGATGCGATTTATGCAAGAAGACGAAGCTGCAAAAACCATGAATCTCTTCGAAGGAGCATCTGATTCTGGAAAAATAAGCAAAGCAGCCCTGAAGAACTGGGTGGTCAATGCCTTCAGGGAAAGGAGAGCGCTTGCTTTGACACTGAATGACACAAAAACGGCAGTGAACAAACTTCATCGAATGCTCAATTTTATAGTTGCAATTGTTGTACTGATTATTTGGCTCTTGATATTGGAACTTGCCACCACCAAATTTCTTGTCTTTTTGAGTTCACAGATTGTCTTGGTTACATTTATATTTGGAAACACCTGCAAGACCATATTTGAAGCAATTATTTTCTTATTTGTCATGCACCCATTTGACGTGGGAGATAGATGTGAAATTGATGGGGTTCAGATGGTGGTAGAAGAAATGAACATATTGACAACCATATTTCTGAAATTTGATAATCATAAGGTGATCATCCCAAACAGTGTCCTTGCTACCAAGGCTATATATAACTATTACCGGAGTCCTGACATGTCAGATATTATCGAATTCTATGTACATGTATGCACCCCAGTGGAAAAGATTTCACTTATAAAACACAGAATAAGCAGTTACTGTGAAAACAAGAAAGAGCACTGGTATCCTTCACCTATTATAGTAATCAGGGATTATGATAATTTAACCATGGTGAAAATGGCCATCTGGCCAAATCATAAAATGAACTTCCAAGATCAAGGAGAAAGGTTTATTAGGAGATCCCTTTTGCTTGAAGAGTTGCTTAAGATTTTCAGGGAGCTCGACCTTAATTACCGTCTCCTGCCCATGGACATTAACGTGAGAGCCGTGCCTACCTCTTCTGAACGGCTTCCTCCTAGTTGGACAACAATTCCAAGTTGA 2754 0.48 MQSIRKSFKSYGSFKQSKRFSGAGNHDSDHEQLPILLDHEPHRHNAMPAGDYVVKIDDAANNPQEGNRIWRESSYDFWNGESSSAAATDQSFDFRQTEDPPSQLIGRFLHKQRASGEMQLDMDLEMEELQREADEGRLTPVEESPVNNRTSRELKVSFDEPLSNSNLLEAQNDVFRRRHSKESSTITEFQRPPQPPHHDRRRSPSPSPAADSEVLRCTSNASFERNLSMQRKSALLKAKTRSRLMDPPEEPDRRSGRVMKSGQLLSGFLGKKTDEEEDDPFLEEDLPDEFKKTHFSFWILLEWVSLILIIGLLIATLCIPFLREKDLWQLRLWKWEVMVLVLICGRLVSDWVIRIAVFCIERNFLLRKRVLYFVYGVKKAVQNCVWLGLVLIAWHLLFDKRVQRETHSDFLEYVNKVLVCFLVGTLVWLLKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIQKAEEEEERLADEVQKLQNAGVTIPPDLRATAFSNIKSGRLRSGVLPKSPRGKSGKFSRPLSKRSDDGNVITIDNLHKLNPNNVSAWNMKRLMNMVRHGALTTLDEQIINSAADDENATQIRSENEAKAAAKKIFQNVARRGCRYLYPDDLMRFMQEDEAAKTMNLFEGASDSGKISKAALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFIVAIVVLIIWLLILELATTKFLVFLSSQIVLVTFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTIFLKFDNHKVIIPNSVLATKAIYNYYRSPDMSDIIEFYVHVCTPVEKISLIKHRISSYCENKKEHWYPSPIIVIRDYDNLTMVKMAIWPNHKMNFQDQGERFIRRSLLLEELLKIFRELDLNYRLLPMDINVRAVPTSSERLPPSWTTIPS* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02515 917 Gene3D - 742 791 IPR023408 -
Lapu7g02515 917 MobiDBLite consensus disorder prediction 129 152 - -
Lapu7g02515 917 MobiDBLite consensus disorder prediction 238 257 - -
Lapu7g02515 917 Pfam Mechanosensitive ion channel 684 856 IPR006685 GO:0016020|GO:0055085
Lapu7g02515 917 PIRSF Memb_At2g17000 39 917 IPR016688 -
Lapu7g02515 917 MobiDBLite consensus disorder prediction 169 215 - -
Lapu7g02515 917 MobiDBLite consensus disorder prediction 1 21 - -
Lapu7g02515 917 MobiDBLite consensus disorder prediction 242 257 - -
Lapu7g02515 917 SUPERFAMILY Sm-like ribonucleoproteins 732 791 IPR010920 -
Lapu7g02515 917 MobiDBLite consensus disorder prediction 1 33 - -
Lapu7g02515 917 FunFam Predicted mechanosensitive ion channel 742 791 - -
Lapu7g02515 917 MobiDBLite consensus disorder prediction 513 536 - -
Lapu7g02515 917 Coils Coil 469 492 - -
Lapu7g02515 917 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 123 912 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02515 Lapu-Chr7 41539176 41543965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02515 51 917 Mechanosensitive Ion Channel Family AT1G78610 56.092 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02515 K22048 - gmx:100789882 1499.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02515 7 41539176 41543965 Lapu7g02515 7 41539176 41543965 ECH