Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02496 ATGATCATCATCATGCAAAACTTATTGGAAAGACTAAGATCCCTAGTGGGTTTGAACGGATGGGACTATTGTATCTACTGGAAATTGAGTGAAGACGAAAGGTTTCTCGAGTGGTTGGGTTGCTGTTGTGGTGGCACTGAAAGCAACCAAAATGCTGGGGAAGAACATCTTTTCCCTGTCTCTTCTGTGGTTTCATGCAGGGATACCACTTATCCACACCCCAGAACAAAGTCCTGTGATCTTCTTTCCCAACTTTCCACTTCCATACCCATAGATAATTCTGGGATTCATACACAGACCTTGTTAACAAATCAACCCAGTTGGGTGAACTATTCCAATAGCTTGGATCCTAGAGTCTTGGATGAAACAATGGGGACCCAGGTTTTGATTTCAGCGCCAGGTGGACTAGTTGAGCTGTTTGTAACCAAACAAGTACCTGAAGACCATCAAGTAATAGATTTTGTCACAAGCCAGTGCATTGAAGCGGTGAACCACTCAATGAGCTTCAACATTGACGTGAATTCAATGAGCAACATGCAACCAAACCCACTTTTAGGCGATGAAAACGAAGGGAACGATAACAGGAACAGTCATTTCCACCCTTCAGAACATGTCATCACTATGGACCATCGCAGTGGCCTGTGCAGTTCTCCACTGAACTTCATGCAGCAGTTCAACTACAACCAGCAGAACAGAATGAAGAGCGATGCCTTTTCTGAAGAATACCAAGGTTCCTTCCTTCATGACCAGCAAACCAACCCAGAAGAGGAGAATGACACGTATCAGAAAAGCATCATCACAACAAATTCACAGTACGTGGAGTCTTTGGACGCAAAGGAGAAGCAAGAGGAGGACAAGGAGTTGCTGAAACACGTTGTTGGTCGATCAGATTCAATGTCAGAATGCAGTGAGCAGAACGAAGAAGAGGAAGATGGAAAGTATAGGAGGAGGAATGGGAAAGGGAACCAGTCCAAGAACCTTATGGCTGAGAGGAAGAGAAGGAAGAAGCTCAATGACAGGTTATACAAGCTTCGTTCTTTGGTTCCACGGATCTCAAAGTTGGATAGGGCTTCTATCCTCGGAGATGCTATTGAATATGTAAAGGATTTGCAGAAGCAAGTGAAGGAGCTCCAAGATGAGCTTGAGGAGAATGCAGACACAGAAAGCAACTGCATCAATGGGAATAATGATAATAATAATAATAATAATAATAATAATAATCAATATGTGGGTGTAGGTGAACTGTGTCCAAACTCTGAACATGCTAAAACCCAATCTGGGTTGCATGTGGGGACATCAGGGAATGGCTATGTGTCCAAACAAAAGCAGGAAGATGAAGCAGTCACTGACAAGCAAACTCAGCAGATGGAGCCACAAGTAGAAGTGGCTCTGATAGATGGGAATGAGTATTTTGTGAAGGTATTCTGTGAACACAAGCCTGGTGGGTTTGTGAAATTGATGGAATCGTTGAGCAGTATTGGCATGGATGTAGTGCATGCCACGGTAACCAGCCACAAGGGCCTCGTGTCAAATGTTTTTGAAGTGGAGAAAAAGGACAGCGAAACTGTTGAGGCTGAAGATGTAAGAGAGTCCCTGCTGGAGCTTACGCGGAACCGTTATAGAGGATGGAGTCATGAGGTGACTGCAACGTCCGAAAATGGTGTGGGAAGGGATCAACATCAACTCCACAACCACCACCAGATTCCTGCTTACCCCCACCATTTTCATACTTAA 1734 0.4429 MIIIMQNLLERLRSLVGLNGWDYCIYWKLSEDERFLEWLGCCCGGTESNQNAGEEHLFPVSSVVSCRDTTYPHPRTKSCDLLSQLSTSIPIDNSGIHTQTLLTNQPSWVNYSNSLDPRVLDETMGTQVLISAPGGLVELFVTKQVPEDHQVIDFVTSQCIEAVNHSMSFNIDVNSMSNMQPNPLLGDENEGNDNRNSHFHPSEHVITMDHRSGLCSSPLNFMQQFNYNQQNRMKSDAFSEEYQGSFLHDQQTNPEEENDTYQKSIITTNSQYVESLDAKEKQEEDKELLKHVVGRSDSMSECSEQNEEEEDGKYRRRNGKGNQSKNLMAERKRRKKLNDRLYKLRSLVPRISKLDRASILGDAIEYVKDLQKQVKELQDELEENADTESNCINGNNDNNNNNNNNNNQYVGVGELCPNSEHAKTQSGLHVGTSGNGYVSKQKQEDEAVTDKQTQQMEPQVEVALIDGNEYFVKVFCEHKPGGFVKLMESLSSIGMDVVHATVTSHKGLVSNVFEVEKKDSETVEAEDVRESLLELTRNRYRGWSHEVTATSENGVGRDQHQLHNHHQIPAYPHHFHT* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02496 577 SMART finulus 327 376 IPR011598 GO:0046983
Lapu7g02496 577 Pfam Helix-loop-helix DNA-binding domain 326 371 IPR011598 GO:0046983
Lapu7g02496 577 MobiDBLite consensus disorder prediction 379 442 - -
Lapu7g02496 577 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 10 157 IPR025610 -
Lapu7g02496 577 MobiDBLite consensus disorder prediction 387 442 - -
Lapu7g02496 577 CDD bHLH_AtAMS_like 324 389 - -
Lapu7g02496 577 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 223 537 - -
Lapu7g02496 577 CDD ACT_UUR-ACR-like 472 535 - -
Lapu7g02496 577 Coils Coil 360 390 - -
Lapu7g02496 577 Gene3D - 310 386 IPR036638 GO:0046983
Lapu7g02496 577 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 321 370 IPR011598 GO:0046983
Lapu7g02496 577 ProSiteProfiles ACT domain profile. 471 543 IPR002912 -
Lapu7g02496 577 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 323 383 IPR036638 GO:0046983
Lapu7g02496 577 MobiDBLite consensus disorder prediction 291 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02496 Lapu-Chr7 41361240 41363784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02496 5 550 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 45.989 1.57e-143 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu7g02496 bHLH-MYC_N 4.6e-19 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02496 - - gmx:100798282 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02496 7 41361240 41363784 Lapu7g02496 7 41361240 41363784 ECH