Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02491 ATGTCTTCTGACCATGGCAGTGGCATTCACTTTGTCAAGAGGATTGAAGAATGCACCCTTAGGAATGGGGAGCTGAGGATTCCTCGGAGTTTTGTGAATAAATGTTGGGAAGAAATATCAAATCCACTGTTCCTTCTGCTTCCTAACGGCTCTAAGTGGGAAATGAATTGGAGAAAAATTAATGGTGAGGTTTGGTTGATCCATAAATGGAAGAAATTTGCAGAATTCTTTTCTTTGGATCAGGACCATCTTTTGCTGTTCACATACGTGGGAAGCTCACAATTTAAGGTTGTAATAATTGATCGAAGTGGCTTGGAGGTGGTTTATCCTTTGATGGAAGGATCTTTAGACAGTGCAGAAAATGGTATTTCTTTGCGCCAGCGTATGAGAGCAACATTTTTTTCACCATTTTCTCCTTCTACTAAGAAGGTGAAAACTAACCCAAGAAAGGAACTTAATAGTAATGCCACCCAGGATGTTGAAACTAAGTGTGCTCAATCACAGAGGAATAGAGTTGAGATGCTAAATAAATTTTCAGGTGACAGGATTGCTGCTACAAAGCCGAAAAAAAGAGGTAGAAGAAGTATCAGGAGATGTTCAAAATCGAAGTTTAAGGCTACTGGAAATGACACTGCTTTAGACAGAGCCAATTCATTCCACTCTGAGAATCCCTTCTTCATTCGTCAGATGCATCCGTCATACATTTTAAAGAATTTCTTGGCTATGCCAGCCAGTTTCATAACAGATGAGGAACTAAAGGGAAATGCTAGAGTTAGACTTTGGATATCTGAGGAGAGATGTTGGGATACGAACTACTATGTGAATAGTAGCAGTAGACAAATAATGCTAGGTTCTGGTTGGGGTGATTTTGTGAAGGAAAATAACCTGAAAATAGGTAACGTATGTGTCTTTGAGAAAGTTAAGAAGCCAGGGATTTCAATTAGAGTAGTTATTTTCCGTGATGCACAAGAATCTAGTACTTCCAACGTTCCAGCTGGTGACGATGATGGAGCAAATAGAAGCAAACAAACAGAGCTTGGAACCACCGTTGCTAACAGAGGCAGAGATGGAATCCCAAAGAAATACCCAAATTCTGAATTTGTTAGACAGAACTATGAAATGTCAGAGAATCAGTTTGTGGCCTTGGTCCAAGCGAACGTGTGCATACCAGCGGAATTCATCAGAGCTCATAAAATGGAGAATGCAGCAAAGGTGATACTGAGAGTTGAGAATAGAACATGGCCTGTGAAACTAGACCATTATCCAGAGTTTGAATGCCATAGATTATCAAATGGTTGGTCTAATTTTCTGCGTGAATCCAAGTTGAATGGAGGGGAAATCTGTAATTTTGAGCTTGTTGATGAGGACAGATTTGTTTTCCAAGTTAGAGTTGCGATATGCATAGATTAA 1410 0.3972 MSSDHGSGIHFVKRIEECTLRNGELRIPRSFVNKCWEEISNPLFLLLPNGSKWEMNWRKINGEVWLIHKWKKFAEFFSLDQDHLLLFTYVGSSQFKVVIIDRSGLEVVYPLMEGSLDSAENGISLRQRMRATFFSPFSPSTKKVKTNPRKELNSNATQDVETKCAQSQRNRVEMLNKFSGDRIAATKPKKRGRRSIRRCSKSKFKATGNDTALDRANSFHSENPFFIRQMHPSYILKNFLAMPASFITDEELKGNARVRLWISEERCWDTNYYVNSSSRQIMLGSGWGDFVKENNLKIGNVCVFEKVKKPGISIRVVIFRDAQESSTSNVPAGDDDGANRSKQTELGTTVANRGRDGIPKKYPNSEFVRQNYEMSENQFVALVQANVCIPAEFIRAHKMENAAKVILRVENRTWPVKLDHYPEFECHRLSNGWSNFLRESKLNGGEICNFELVDEDRFVFQVRVAICID* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02491 469 Gene3D - 205 323 IPR015300 -
Lapu7g02491 469 Gene3D - 360 467 IPR015300 -
Lapu7g02491 469 SMART B3_2 11 103 IPR003340 GO:0003677
Lapu7g02491 469 SMART B3_2 226 322 IPR003340 GO:0003677
Lapu7g02491 469 SMART B3_2 379 466 IPR003340 GO:0003677
Lapu7g02491 469 SUPERFAMILY DNA-binding pseudobarrel domain 9 104 IPR015300 -
Lapu7g02491 469 ProSiteProfiles B3 DNA-binding domain profile. 225 322 IPR003340 GO:0003677
Lapu7g02491 469 ProSiteProfiles B3 DNA-binding domain profile. 10 103 IPR003340 GO:0003677
Lapu7g02491 469 CDD B3_DNA 224 320 IPR003340 GO:0003677
Lapu7g02491 469 CDD B3_DNA 10 101 IPR003340 GO:0003677
Lapu7g02491 469 Pfam B3 DNA binding domain 226 320 IPR003340 GO:0003677
Lapu7g02491 469 Pfam B3 DNA binding domain 19 102 IPR003340 GO:0003677
Lapu7g02491 469 Pfam B3 DNA binding domain 385 463 IPR003340 GO:0003677
Lapu7g02491 469 MobiDBLite consensus disorder prediction 326 355 - -
Lapu7g02491 469 SUPERFAMILY DNA-binding pseudobarrel domain 219 320 IPR015300 -
Lapu7g02491 469 ProSiteProfiles B3 DNA-binding domain profile. 372 466 IPR003340 GO:0003677
Lapu7g02491 469 Gene3D - 5 104 IPR015300 -
Lapu7g02491 469 PANTHER B3 DOMAIN-CONTAINING 369 460 - -
Lapu7g02491 469 SUPERFAMILY DNA-binding pseudobarrel domain 387 464 IPR015300 -
Lapu7g02491 469 CDD B3_DNA 389 463 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02491 Lapu-Chr7 41317304 41319432 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02491 11 320 B3 DNA Binding Superfamily AT3G18990 26.801 1.53e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lapu7g02491 B3 1.1e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02491 - - vun:114191440 528.48