Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02486 ATGGGTAGTTGTGGAAGAGAAGGAGCTGTTAGGCAATATATAAGGTCAAAGGTTCCTCGTTTAAGGTGGACTCCCGAGCTGCACCGCTGCTTTGTTCACGCCATTGATAGCCTTGGAGGTCATCAAAAGGCTACTCCAAAGCTTGTTCTTCAGTTGATGGATGTCAAAGGGCTCACAATTTCACACGTCAAGAGTCATCTTCAGATGTACCGAAGCATGAGGGGCGACTTGGGCAGACAAGGTAGGACACCCTCCCAACATAGGAACCAATCTTTTGAGGAGCACGATGATGGGTGTGTTGATGAAGTGAATGATGTTGGGGTTGAGTACTCATGTTCGAAACCCATGGGAAGAGAATCTGATTCCTTCTTCGGCCACAGCAATCTCCCTCCAAAAAGAGCAAGAATCGAGACGAGGAGTTCCATCTCAGAGAGCCTGCAATGCAGCCAAAGATTATGTGATGCAGTTCCAAATCCGTACTGTTTTTATGATTATCTGCAGAAGCCCATGGCTGAGCACAAGGGAATAAAGGAGTTCTGTGAGGCTTCAACATGGCAGACACAACCCCATTCCTCTCTGTTACCTCATTTTCCCAACCTCACTTCATTCCCATGTCCTAACCAACAATCAGACTTCCTCCAGGTCACAAAATTAAATGAAGGAAAGAGCAGTGGAAAGCCAATTAATGTAGATGTGAACATTGAGACAGGTGATGCAGAAGTTGAAGATGGAGGAGGGTATGAATTGTCCTTGTCTCTCACATTGCCAAATCCTTCACCTCAGAGAAGTAATGGTTCATGTTCAGGCAGTGAGATCAGTGAGGCAATCTCATCATGCCCTGCTGCAGGGTTTAGCAACTACAAAGACTGCACTAGTTCATCCACTCTCAAAGAAACAATTAATTTGGACCTTTCTTTAGCCCTATGTGGCAATTGA 936 0.4551 MGSCGREGAVRQYIRSKVPRLRWTPELHRCFVHAIDSLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRTPSQHRNQSFEEHDDGCVDEVNDVGVEYSCSKPMGRESDSFFGHSNLPPKRARIETRSSISESLQCSQRLCDAVPNPYCFYDYLQKPMAEHKGIKEFCEASTWQTQPHSSLLPHFPNLTSFPCPNQQSDFLQVTKLNEGKSSGKPINVDVNIETGDAEVEDGGGYELSLSLTLPNPSPQRSNGSCSGSEISEAISSCPAAGFSNYKDCTSSSTLKETINLDLSLALCGN* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02486 311 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Lapu7g02486 311 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 109 IPR046955 GO:0003700
Lapu7g02486 311 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Lapu7g02486 311 Gene3D - 18 74 - -
Lapu7g02486 311 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Lapu7g02486 311 FunFam Myb family transcription factor 17 75 - -
Lapu7g02486 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Lapu7g02486 311 MobiDBLite consensus disorder prediction 76 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02486 Lapu-Chr7 41276572 41281147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02486 1 74 G2-like Transcription Factor Family AT1G14600 74.684 1.48e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu7g02486 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02486 - - gmx:100787188 463.381