Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02462 ATGGGATCGAAACTTCTTCCGCAATGGGCATCAAAGCCTTGCGTCATGGGAATCGACGAAGCTGGAAGAGGCCCTGTTTTAGGGCCTATGGTTTACGGTTGCTTATACTGTGCTCAGTCTTATATGAAAACCCTAGCCACGTTGAGTTTTGCAGATTCTAAGACACTAAAGGAAGAGAAGAGGGAAGAGTTGTTTGAAACTTTAAAGACCAATGATTCTATTGGATGGGCTGTTGATGTCATTGACCCCCGGGAACTCTCCGCTAAAATGCTTAAGAAGAATAAGATAAACTTGAATGAGATTTCACATAACTCTGCCATGGGCCTCGTTGATAGGGTGCTAAAAATGGGAGTGCTTCTAACTGAGGTGTATATAGACACAGTTGGAGATGCAGGGAAATATGAAATGAAGCTGTCTAGAAGTTTTCCATCCATAAAATTTGTGGTTGCAAAGAAGGCTGATAGCCTTTACCCCGTTGTTAGTGGTGCAAGCATAGTTGCAAAGGTCACAAGAGACCGTGCTTTAAGAGAATGGGTACTTGATGAGAGTGCTGAAAACATGCAGAGGAACTTTGGCTCTGGATATCCTGGAGATCCCCAAACCAAGGCTTGGCTAGAGGATCACAAACATCATATCTTTGGATTTCCAACATTGGTTCGATTTAGTTGGGGAACCTGCAACTCTTATTTTAAAGATATTGCACAAGTGTTATGGGAGTCTGACAATTTGGATGAAGGTGGTGGAAATAATAGTAATGGCAAGCGGCAATTGAAATTAAGCAATGTGGGTTTCACCACATCCAAGAGAAGTGAAGAAATAGAATCAAGTGGTAAAGGACGCTGTAGGTTTTTTCAGGCTCGTAAACTTGAGCACCTCACTAATTTCTAA 888 0.4212 MGSKLLPQWASKPCVMGIDEAGRGPVLGPMVYGCLYCAQSYMKTLATLSFADSKTLKEEKREELFETLKTNDSIGWAVDVIDPRELSAKMLKKNKINLNEISHNSAMGLVDRVLKMGVLLTEVYIDTVGDAGKYEMKLSRSFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWVLDESAENMQRNFGSGYPGDPQTKAWLEDHKHHIFGFPTLVRFSWGTCNSYFKDIAQVLWESDNLDEGGGNNSNGKRQLKLSNVGFTTSKRSEEIESSGKGRCRFFQARKLEHLTNF* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02462 295 FunFam Ribonuclease 187 234 - -
Lapu7g02462 295 Pfam Ribonuclease HII 16 226 IPR024567 GO:0004523
Lapu7g02462 295 Gene3D - 1 185 IPR036397 GO:0003676
Lapu7g02462 295 Gene3D Ribonuclease hii. Domain 2 186 234 IPR023160 GO:0004523
Lapu7g02462 295 SUPERFAMILY Ribonuclease H-like 14 231 IPR012337 -
Lapu7g02462 295 CDD RNase_HII_eukaryota_like 16 232 - -
Lapu7g02462 295 PANTHER RIBONUCLEASE H2 SUBUNIT A 5 282 IPR001352 GO:0003723|GO:0004523
Lapu7g02462 295 FunFam Ribonuclease 1 185 - -
Lapu7g02462 295 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 13 235 IPR024567 GO:0004523
Lapu7g02462 295 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Lapu7g02462 295 NCBIfam ribonuclease HII 15 227 IPR004649 GO:0004523|GO:0016070
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02462 5 295 Core DNA Replication Machinery Family AT2G25100 67.466 3.48e-146 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02462 K10743 - gmx:100779875 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02462 7 41061174 41064533 Lapu7g02462 7 41061174 41064533 ECH