Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02451 ATGGGAAAGAAAGCTTTGAAACTTCCCTCTCTTTTCAAAACCAAAGAAGCACCAAGAAAGCATCGTCATCTTCCTCACAATCATCATCCATGGCAATTCATACCATCTTGTGGCCACTCCAAGACCCTCTCTTTCCGAGGTGGCCATGATGACATCTTCAAGACAGTTAACTCCGTGTTCTTCGACCCTTCAGAGAGTGCCATCGAAACTCCCAAGTCATGGTTCACTACCTCATCTGAATCTGCCAGCATCTCAACTGAGTCAGAAGACTACTACTACTGTGATGGGGAGTCTTTGGAGATGTTGGTACGTGGTGTGAGATCAGAGAGGCTTTTCTTCGAGCCAGGTGACACAAGCTCCATCTTGGAAAAGGCAAAGGCCAGTGGGTTTCCCTTCAAAGAAAGTGTGGTTCTTGCCATGGAGTCGGAGGACCCTTATGAGGATTTCAAGAGATCAATGGAGGAGATGGTGGAGTCTCATGGAGTAAGGGATTGGGAGGGCTTGGAGGAGCTTTTGACTTGGTATCTCAAGGTCAATGGTAGGAACAATCACGGATTTATAGTGGGTGCTTTCGTTGATTTGCTCTTCAGTTTAGCAGCTTCTAATAATTCTAACTCTTGTTCTGATTCAACTGCATATTCTTCTGCTATTTCTTCTTTTGCTTCTTCCCCCTTATGTGACGAGATTGTTGAGCATGGGATTGGGAATGATGATGCTGTAACATCTTAG 729 0.4513 MGKKALKLPSLFKTKEAPRKHRHLPHNHHPWQFIPSCGHSKTLSFRGGHDDIFKTVNSVFFDPSESAIETPKSWFTTSSESASISTESEDYYYCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVRDWEGLEELLTWYLKVNGRNNHGFIVGAFVDLLFSLAASNNSNSCSDSTAYSSAISSFASSPLCDEIVEHGIGNDDAVTS* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02451 242 ProSiteProfiles OVATE domain profile. 138 197 IPR006458 -
Lapu7g02451 242 NCBIfam uncharacterized plant-specific domain TIGR01568 136 199 IPR006458 -
Lapu7g02451 242 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 24 199 IPR038933 GO:0045892
Lapu7g02451 242 Pfam Transcriptional repressor, ovate 142 198 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02451 Lapu-Chr7 40943418 40944146 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lapu7g02451 Ovate 4.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02451 - - vun:114190765 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00686 6 7167865 7170144 Lapu7g02451 7 40943418 40944146 ECH
Lapu7g02451 7 40943418 40944146 Lapu7g02451 7 40943418 40944146 ECH