Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02446 ATGGCGATAGGTGCAGCTTCCATGGGTGTTCATGGATGGGGAGACATGAAAAGTCTCACCATCCAAGTCGTCACCGGTCGATGGTTCGTCGTCTTTGCCTCCTTTCTCATCATGGCTGCTGCTGGAGCCACCTACATGTTCGGCCTCTACTCAAGCGACATCAAAACCACCCTTGGCTACGACCAAACCACTCTCAATCTCCTCAGTTTCTTCAAGGACTTAGGCACCAACGTTGGGGTCCTCTCTGGTCTTATCAACGAGCTCACTCCACCCTGGGTGGTGCTAGCCATTGGTGCTGTCCTAAACTTCTTTGGTTACTTCATGATTTGGCTCTCAGTCACCAAAAAAATAGCCAAACCGCAGGTGTGGCAGATGTGCCTCTACATCTGCATAGGTGCTAACTCTCAGTCCTTCGCCAACACCGGTTCCCTAGTCACGTGTGTCAAGAACTTCCCAGAAAGTCGTGGTGTTGTGTTAGGCATTCTCAAAGGCTACGTGGGTCTTAGTGGTGCAATCATCACACAATTGTACTCTGCTATTTACTATGACGACACAAGGGCTTTGATTTTGCTCATAGGTTGGCTTCCAGCTGCTATTTCCTTTGCTTCCCTTCGAACCATTCGTTATATGAAGCCGGTTAGGCAGCCTAACGAGCTCAAGGTTTTCTACAACTTTCTCTATATTTCTCTTGGCCTTGCTGGGTTTCTTTTGGTCATGATTACCATACAGAAAAGGGTCAACTTCACTCAGAGTGAGTTTGGTGTGAGCGCCGCTATTGTGCTCTTCTTGCTCTTGCTCCCACTTGCTATTGTTTCCATCGAAGAACATAAGATCTGGCAGAGTAAAAGGCTTGCTTTGGTTGATCCTTCCCCGGTGAAAATAGTAACCGAGAGTGAAAGGGTTAAACCGAATGAGGCTACTAATTGTAGCAATTCAGTCTCAGCAGTTTCCAACGACACCAAGTGGTGGGAAAATGTGTTTAGTCCACCAGAAAGAGGCGAGGACTATACAATACTTCAAGCACTATTCAGCATCGACATGTTTCTCCTATTCATATGTAGCATCTGTGGTATTGGGGGCACGTTGACTGCAATAGATAATCTGGGTCAGATAGGAAAGTCGCTTAGATACCCCAAGAAAAGCATAAGCACTTTCGTGTCCCTAGTAAGCATTTGGAATTATCTGGGACGGGTTTTCTCTGGATTTGTTTCTGAACATTTTCTACACAAGTACAAGTTCCCCCGTCCTCTTATGCTTACTTTAACTATGCTCCTATCATGTGTTGGCCACCTTCTGATAGCATTTGATGTGCCAAATGGCCTTTATGCGGCTTCGGTAATCATAGGGTTTTGTTTTGGCGCTCAGTGGCCTTTACTTTTTGCCATTATATCCGAGCTTTTTGGACTAAAATATTATGCAACTTTGTACAACTTTGGAAGTGCAGCAAGTCCACTAGGGCTATATGTTCTTAATGTGGTGATGACTGGCCATTTATATGACAAGGAAGCAAAGAAGCAACTGGCAGCGTTGGGACTTGAAAGAAAGGAAGGGCAGGAATTGAATTGCATAGGGGTCCATTGCTTCAAGCTATCCTTCATTATTATCACTGCTGCAACTTTCTTTGGTGTCATTGTTTCAGTGATTTTGGTGGGTAGGACAAGAAGGTTTTACAAAGGTGACATATACAAGAGATTCAGGGATGCAGCCACGACAGAAGCTGAAATGGCAGGGGTGGAAAACGGAAACAAGGCAGATAAAGATGGCAAACATGTGGTGCCAACTCATGATCATGAGCAGAACCAGGACTAA 1809 0.4533 MAIGAASMGVHGWGDMKSLTIQVVTGRWFVVFASFLIMAAAGATYMFGLYSSDIKTTLGYDQTTLNLLSFFKDLGTNVGVLSGLINELTPPWVVLAIGAVLNFFGYFMIWLSVTKKIAKPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYSAIYYDDTRALILLIGWLPAAISFASLRTIRYMKPVRQPNELKVFYNFLYISLGLAGFLLVMITIQKRVNFTQSEFGVSAAIVLFLLLLPLAIVSIEEHKIWQSKRLALVDPSPVKIVTESERVKPNEATNCSNSVSAVSNDTKWWENVFSPPERGEDYTILQALFSIDMFLLFICSICGIGGTLTAIDNLGQIGKSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLHKYKFPRPLMLTLTMLLSCVGHLLIAFDVPNGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSAASPLGLYVLNVVMTGHLYDKEAKKQLAALGLERKEGQELNCIGVHCFKLSFIIITAATFFGVIVSVILVGRTRRFYKGDIYKRFRDAATTEAEMAGVENGNKADKDGKHVVPTHDHEQNQD* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02446 602 MobiDBLite consensus disorder prediction 579 602 - -
Lapu7g02446 602 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 562 - -
Lapu7g02446 602 MobiDBLite consensus disorder prediction 576 602 - -
Lapu7g02446 602 Pfam Nodulin-like 27 271 IPR010658 -
Lapu7g02446 602 CDD MFS_Mch1p_like 26 543 - -
Lapu7g02446 602 FunFam Nodulin family protein 338 559 - -
Lapu7g02446 602 SUPERFAMILY MFS general substrate transporter 27 556 IPR036259 -
Lapu7g02446 602 Gene3D MFS general substrate transporter like domains 339 556 IPR036259 -
Lapu7g02446 602 Gene3D MFS general substrate transporter like domains 22 214 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02446 Lapu-Chr7 40856880 40858803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02446 5 567 Nodulin-like Gene Family AT2G39210 72.134 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02446 - - pvu:PHAVU_007G024800g 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02446 7 40856880 40858803 Lapu7g02446 7 40856880 40858803 ECH
Lapu6g00544 6 5690474 5692850 Lapu7g02446 7 40856880 40858803 ECH