Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02440 ATGCAAAGCTTCAACCCAACAGAATCAGAATCAACCTCACCACTCTATTCCCACTCTTCCTTCATTCACAGGGGAAATGACACCAACCGAAATCCATCGCGTTTCTCTGATCTTCAGCATTCTTTTCGACAGCACGATGCTGTTGATTTAAGCTCAAGTTCTGTGTTTGGTGCAAAGTCGAACAATGTAGCTGTTGTTGCAAGCAACTTGCAGTGTGGGACATTCAACACGAACCTTGGAGGTGCAGAGTTTGCTTCGACAGTTGTAGGGTGTGTTGAGACAGAGGGTCAACACATGTATCAGAGAGGAAACAATAACGCCACCATGTCCATGGGCAACCAGTATGTTGAGAAATGGGCAGATGATAGCCAACACACCGAAGATACTTGCACAGATATCGACACCGATGATAAGAATCAATGTTTCTCTACCGTGTCGTGGGGCAATGGAGTTGGGGACGGAGCACTTGTAGTTGTGGATTCCCAGGATCAAAGTAAGATTAAGGTTAAAGCTGAAGACCAGAAGACTGTACGTAGGCTAGCTCAGAATAGGGAGGCTGCCAGGAAGAGTCGGTTAAGGAAAAAGGCGTATGTGCAACAGTTGGAGAACAGTCGAGTTAGGCTTGCACAATTAGAGCAAGAGCTTCAACGGGCACGTCAGCAGGGTGTTCCTATTGCAAGTGGGATCACGGGTGATCGCGGTCATTCAGCTGTTGGAAATGGCGCGTTAGCATTTGACATGGACTATGCCCGATGGGTCGATGAGCATCAACGGCTGATCAATGACATAAGATCTGCTATAAATTCTCGAATGGGAGATAATGAACTGCATCTTCTTGTTGATGGAGTCATGGCACATTACGATGAACTATTTAGGTTGAAGAGCATAGGGGCAAAGGCTGATGTATTTCACATACTTTCTGGGATGTGGAAGACTCCTGCAGAAAGATGCTTCATATGGCTTGGGGGATTTCGGTCGTCTGAACTTCTCAAGATAGTTAGAAACCAGCTTGAGCCATTAACAGAAGAGCAGCTGATGGGCATTTACAATCTACAACAGTCTTCCCAGCAGGCTGAGGATGCATTATCACAAGGCATGGAAGCATTGCAGCAGTCTCTTTCAGATACACTCTCGTCCTCCTCCCAGGGACCCCCTGGTTCTGGAAATGTTGCCGAGTACATGGGCCAAATGGCAATTGCATTGGGCAAGCTTGCCACACTTGAGAGTTTCCTTCATCAGGCTGATCTCTTGAGGCAACAAACTCTGCAACAGATGCGCAGAATTTTGACTACTTTCCAAGCTGCGCGGGCACTCCTTGTCATAAATGATTACGTTTCAAGACTCAGAGCTCTGAATTCTCTATGGTTAGCGTGCCCTAGAGAGTACTAG 1389 0.468 MQSFNPTESESTSPLYSHSSFIHRGNDTNRNPSRFSDLQHSFRQHDAVDLSSSSVFGAKSNNVAVVASNLQCGTFNTNLGGAEFASTVVGCVETEGQHMYQRGNNNATMSMGNQYVEKWADDSQHTEDTCTDIDTDDKNQCFSTVSWGNGVGDGALVVVDSQDQSKIKVKAEDQKTVRRLAQNREAARKSRLRKKAYVQQLENSRVRLAQLEQELQRARQQGVPIASGITGDRGHSAVGNGALAFDMDYARWVDEHQRLINDIRSAINSRMGDNELHLLVDGVMAHYDELFRLKSIGAKADVFHILSGMWKTPAERCFIWLGGFRSSELLKIVRNQLEPLTEEQLMGIYNLQQSSQQAEDALSQGMEALQQSLSDTLSSSSQGPPGSGNVAEYMGQMAIALGKLATLESFLHQADLLRQQTLQQMRRILTTFQAARALLVINDYVSRLRALNSLWLACPREY* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02440 462 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Lapu7g02440 462 MobiDBLite consensus disorder prediction 1 36 - -
Lapu7g02440 462 SMART brlzneu 171 242 IPR004827 GO:0003700|GO:0006355
Lapu7g02440 462 PANTHER TRANSCRIPTION FACTOR TGA9 106 461 - -
Lapu7g02440 462 Coils Coil 194 221 - -
Lapu7g02440 462 Gene3D - 174 222 - -
Lapu7g02440 462 ProSiteProfiles DOG1 domain profile. 242 458 IPR025422 GO:0006351|GO:0043565
Lapu7g02440 462 FunFam BZIP family transcription factor 174 223 - -
Lapu7g02440 462 Pfam Seed dormancy control 260 334 IPR025422 GO:0006351|GO:0043565
Lapu7g02440 462 Pfam bZIP transcription factor 174 214 IPR004827 GO:0003700|GO:0006355
Lapu7g02440 462 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 217 IPR004827 GO:0003700|GO:0006355
Lapu7g02440 462 SUPERFAMILY Leucine zipper domain 175 218 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02440 Lapu-Chr7 40799177 40802564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02440 12 461 bZIP Transcription Factor Family AT1G68640 55.484 4.81e-159 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu7g02440 DOG1 8.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02440 K14431 - gmx:100775783 758.059