Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02404 ATGGCAGCAACACTCTCTCACCTCATTGCTCCTGTTCTGGTTCTTCATTTTCTTCTTCTCACGGTTCAAGGTTCCAATAACCCAGATTTCGACGCTCTCGTCGCCTTCAAAACCGCTTCAGACACTTCCCAAAAGCTCACAACATGGAACACCAGCAGCACCAACCCCTGTTCCTGGAGCGGCGTGTCGTGCATTCACAACCGAGTCTCGCGACTCGTTCTCGAAAACCTCGACCTCCAAGGCTCTATTCACCCCTTGACTTCCCTAACTCAGCTCCGAGTTCTCAGTCTCAAAGGAAACCGTTTCTCCGGTTCCGTTCCCAACCTCTCTAACCTCACCGCCCTCAAACTCCTCTTCTTGTCTCGCAACGCCTTCTCCGGTGAGTTTCCCGCGACCGCCACATCGCTCTTCCGCCTATACCGACTTGATCTGTCCAACAACAACTTCTCCGGCGAGATTCCGGCGACGGTCTCCCACTTGACCCACCTCCTCACTCTCCGCCTCGATGGGAACAAGTTCTCCGGCCACATTCCAGATGTCAACCTCCCCAACCTCCAAGAATTCAACGTCTCCGGAAACCGCCTCTCCGGCGAGATACCCAAAGCATTATCAAGTTTCCCCGAATCCTCATTCGGGCAAAACCCGTTTCTCTGCGGTGCCCCAGTTAAAAAATGCGCATTGGACCCAACCAAACCCGGATCCGAAGGCGCCATTGCTTCACCGTTGTTACCACATAACAGTAACAACCCAACAACTACCGTATCATCCTCACCAAGTTCAATGCCAAAAACATCAACAACAACGTCAAGTAGTAAAAGCCACGAGAAGGGTGCTTCTAAAATAAGCCCGGTGGCACTTATAGCTATCATAGTAGGTGATGTTTTGGTTCTTGCAATAGTGTCATTGCTTTTGTATTGTTACTTCTGGAGAAACTACAAGTTAAAGGAGGGTAAAGGGTCGAAGCTTTTTGAGAGTGAGAAGATTGTGTATTCATCTAGTCCGTACCCTGCTCAGGGAGGGTTTGAGAGGGGGCGCATGGTGTTCTTCGAGGGTGAGAAAAGGTTCGAACTTGAGGACTTGCTGCGAGCCTCTGCGGAAATGCTTGGAAAGGGAGGGTTTGGGACCGCGTACAAAGCAGTGCTCGATGATGGGAACGTGGTTGCGGTGAAGAGACTGAAGGACGCGCAGATTACAGGGAAGAGGGAATTCGAGCAACACATGGAGGTGTTGGGAAGGTTAAGGCATCCAAATGTTGTTAGTTTGAGAGCTTACTATTTTGCGCGCGAGGAGAAGTTGCTGGTCTATGATTACATGCCCAATGCCACCTTGTTCTGGCTCCTTCACGGGAACCGAGGACCCGGACGAACCCCATTGGACTGGACCACGAGGCTGAAGATAGCAGCGGGAGCGGCGAGAGGCGTGGCTTTCATTCATAACTCGTGCAAGTCCCTTAGACTCACCCACGGTAACATCAAATCCACCAACGTCTTACTCGACAAGCAGGGCAACGCGCACGTGTCTGATTTCGGGCTCTCGGTTTTCGCGGGCCCGGCCCCAGTGGGTGGGAGACCCAACGGCTACCGCGCGCCGGAGGCGTTGGATGGTCGAAAACAGACCCAGAAGTCTGACGTTTACTCTTTCGGTGTGCTCCTGCTGGAAATGCTGACAGGGAAGTGCCCTTCCGTGGTGGACAGTGCAGGCGGTGCTTACGGTGGGGTGGTGGACCTGCCCAGGTGGGTCCAGTCAGTGGTGAGGGAGGAATGGACGGCTGAAGTGTTTGATTTGGAGCTGATGAGGTATAAGGATATTGAGGAGGAGATGGTGGGGCTGCTTCAGATTGCGATGGCGTGTACCGCGGCTGCACCTGATCAACGGCCGAGGATGAGCCACGTCGTCAAGATGATTGAGGAGTTGCGTGGGGTTGAGGTGTCGCCGTGTCATGACTCGACGGACTCCGTTTCCGAGTCACCTTCCATGTCTGAAGATGCATGTGGAACGAGTCAGTGA 2007 0.5326 MAATLSHLIAPVLVLHFLLLTVQGSNNPDFDALVAFKTASDTSQKLTTWNTSSTNPCSWSGVSCIHNRVSRLVLENLDLQGSIHPLTSLTQLRVLSLKGNRFSGSVPNLSNLTALKLLFLSRNAFSGEFPATATSLFRLYRLDLSNNNFSGEIPATVSHLTHLLTLRLDGNKFSGHIPDVNLPNLQEFNVSGNRLSGEIPKALSSFPESSFGQNPFLCGAPVKKCALDPTKPGSEGAIASPLLPHNSNNPTTTVSSSPSSMPKTSTTTSSSKSHEKGASKISPVALIAIIVGDVLVLAIVSLLLYCYFWRNYKLKEGKGSKLFESEKIVYSSSPYPAQGGFERGRMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQITGKREFEQHMEVLGRLRHPNVVSLRAYYFAREEKLLVYDYMPNATLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHNSCKSLRLTHGNIKSTNVLLDKQGNAHVSDFGLSVFAGPAPVGGRPNGYRAPEALDGRKQTQKSDVYSFGVLLLEMLTGKCPSVVDSAGGAYGGVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMACTAAAPDQRPRMSHVVKMIEELRGVEVSPCHDSTDSVSESPSMSEDACGTSQ* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02404 668 Gene3D Ribonuclease Inhibitor 88 231 IPR032675 -
Lapu7g02404 668 Gene3D Ribonuclease Inhibitor 22 87 IPR032675 -
Lapu7g02404 668 FunFam Leucine-rich repeat receptor-like protein kinase 26 179 - -
Lapu7g02404 668 CDD STKc_IRAK 368 638 - -
Lapu7g02404 668 Pfam Protein kinase domain 366 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02404 668 MobiDBLite consensus disorder prediction 647 668 - -
Lapu7g02404 668 FunFam pollen receptor-like kinase 1 335 437 - -
Lapu7g02404 668 SUPERFAMILY L domain-like 38 222 - -
Lapu7g02404 668 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 438 645 - -
Lapu7g02404 668 ProSiteProfiles Leucine-rich repeat profile. 91 113 IPR001611 GO:0005515
Lapu7g02404 668 ProSiteProfiles Protein kinase domain profile. 362 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02404 668 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 640 IPR046959 -
Lapu7g02404 668 MobiDBLite consensus disorder prediction 644 668 - -
Lapu7g02404 668 Gene3D Transferase(Phosphotransferase) domain 1 438 655 - -
Lapu7g02404 668 MobiDBLite consensus disorder prediction 241 275 - -
Lapu7g02404 668 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Lapu7g02404 668 Gene3D Phosphorylase Kinase; domain 1 342 437 - -
Lapu7g02404 668 SUPERFAMILY Protein kinase-like (PK-like) 366 635 IPR011009 -
Lapu7g02404 668 MobiDBLite consensus disorder prediction 236 275 - -
Lapu7g02404 668 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02404 Lapu-Chr7 40284862 40287596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02404 29 668 Receptor kinase-like Gene Family AT1G68400 67.325 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu7g02404 Pkinase 1.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02404 - - vum:124834036 1225.31