Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02403 TCACAAAAACAAAAAGTAGTTCCTTCCTTCATTTTATTTATTTTAGTTTCTCTGTTCTTGACGTTCCTAGTCCAAATGGTGTCCCTTCTAATGTTGAAATCACTAGTTTTATTTTTGTCCCACTTTCTGCTACTTGTTTCAGCTCAGAATTCTCACTGTCCAACCTCTTTCAACTGTGGATCTCTTGGCCTCATTCAGTTTCCTTTCACGACCACACAGCAACCACACTGTGGCGTGCTGGCCATACGTGGCTGTGAAGAACACAACCCATCTGCTCCTAAAACCGTCCAGCTAACCACCACAACATCAACATGGTACACCGTTCAGCGGGTTCAACCTCGTACCATAATAATCCAAGACGATGAACAAGATCGCTATTTGCGATCCAAAAATTGCACAGCCTTCACCCACAATTTAACCCTTCCTCACACCTCTCCTTTGGCTTCTTTCAGCATCAAATATGACATCACTATCTTCAGATGCAAACTCTCCCTCAACCTCAACCTTCCCCAAGAATTTTACAAGTATTCAAACTGTTCTCAGTACAGCATCTACTACGGCCACACAAATACTGAACTGCCCCTGGACTTCAAGTGGCCCAGCTCTTTAGCACCATGTTCCACGATTCAGCTTGCAATACAAGGAAAGCATACTAGCGATCCTTTTCAATTTCTATCTGGAACTAATGTTATTCAAGTGCTGTTATCTGCTGATTGTGAAAGGTGTATTCGAGATGGAAAGGGACAATGTTTACTTGACAGTAAAGGAAAACTCTATTGCGCCAAAGGGAGAAGAAGTTGGGTGGTGAAAAATCTAAATATGATACTCGGAGTGGGACTAGCTGTTACAATTGCTCTGTTGCTAGTAGTAATAGTCACGGTCTACTATACAAGATGGAAGAAACAAAACCCAACCAATCAACGGATTGAGGTCTTTTTGAAGAGACATGGACCCCTTCAAGCCAAGAGGTATCGTTATTCAGAGATAAAGAAAGTGACCAACTCCCTCGGGAACAAATTAGGCCAAGGAGGGTTCGGTAGTGTATACAAAGGAAAACTTCAGGATGGACGTGATGTTGCAGTGAAGATCCTAAATGAATTGAAAGATAACGGTGATGAATTCATCAATGAAGTTGCAAGTATCAGCAGAACTTCTCATATCAACATTGTCACTCTTTTGGGGTTCTGTTACGAAGGTTCTAAAGGGGCTTTGGTTTATGAGTTTATGCCTAATGGATCACTTGAAAAGTTTATCTTTGAAGAAAATTCCCTATTGACAGATAATCAATTGGACTGTCAAATGATGTACCATATTGCAATTGGTGTTGCTCGAGGACTAGAATACCTACATAAAGGTTGCAATATAAGAATTTTACATTTTGACATAAAACCTCATAACATTCTCCTGGATGAGAATTTTAACCCTAAGATTTCAGACTTTGGTCTAGCAAAAATTTGCACTAGAAAAGAAAGTATGGTTTCAATATTTGGTGCTAGAGGAACTGCAGGGTATATTGCTCCAGAAGTTTTTTCTAGAAACTTTGGTATAGTATCACATAAGTCGGATGTTTACAGTTATGGAATGATGATCTTAGAAATGATTGGAGGAAGAAGGAATTTTAAAGATGAAGCAGACCCATCAAGTGAAATACACTTTACTGATTGGATTTACAAGCGTCTTGAATCAAACCAGGAGCTTGATTTACAAATTATAAGAAATGAAAGTGATGAGAAATTGATGAGAAAGATGACAATAATAGGCATTTGGTGTATACAAACTAATCCTTCAACTCGACCTACCATAAGTAAAGTGCTGGAAATGCTAGAAAGCAAAGTTGAGTTATTGCAAATTCCTCCTAGACCTTTCTTGTCTTCTCCTCAAACCTCTCCGGTTTATTTATCATGTGATACATTGTAG 1917 0.3907 SQKQKVVPSFILFILVSLFLTFLVQMVSLLMLKSLVLFLSHFLLLVSAQNSHCPTSFNCGSLGLIQFPFTTTQQPHCGVLAIRGCEEHNPSAPKTVQLTTTTSTWYTVQRVQPRTIIIQDDEQDRYLRSKNCTAFTHNLTLPHTSPLASFSIKYDITIFRCKLSLNLNLPQEFYKYSNCSQYSIYYGHTNTELPLDFKWPSSLAPCSTIQLAIQGKHTSDPFQFLSGTNVIQVLLSADCERCIRDGKGQCLLDSKGKLYCAKGRRSWVVKNLNMILGVGLAVTIALLLVVIVTVYYTRWKKQNPTNQRIEVFLKRHGPLQAKRYRYSEIKKVTNSLGNKLGQGGFGSVYKGKLQDGRDVAVKILNELKDNGDEFINEVASISRTSHINIVTLLGFCYEGSKGALVYEFMPNGSLEKFIFEENSLLTDNQLDCQMMYHIAIGVARGLEYLHKGCNIRILHFDIKPHNILLDENFNPKISDFGLAKICTRKESMVSIFGARGTAGYIAPEVFSRNFGIVSHKSDVYSYGMMILEMIGGRRNFKDEADPSSEIHFTDWIYKRLESNQELDLQIIRNESDEKLMRKMTIIGIWCIQTNPSTRPTISKVLEMLESKVELLQIPPRPFLSSPQTSPVYLSCDTL* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02403 638 SUPERFAMILY Protein kinase-like (PK-like) 319 609 IPR011009 -
Lapu7g02403 638 FunFam serine/threonine-protein kinase PBS1-like 302 408 - -
Lapu7g02403 638 Gene3D Transferase(Phosphotransferase) domain 1 409 621 - -
Lapu7g02403 638 PANTHER RUST RESISTANCE KINASE LR10-RELATED 306 625 IPR045874 GO:0004672
Lapu7g02403 638 ProSiteProfiles Protein kinase domain profile. 334 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02403 638 Gene3D Phosphorylase Kinase; domain 1 310 408 - -
Lapu7g02403 638 CDD STKc_IRAK 340 609 - -
Lapu7g02403 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Lapu7g02403 638 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Lapu7g02403 638 SMART serkin_6 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02403 638 FunFam PR5-like receptor kinase 409 619 - -
Lapu7g02403 638 Pfam Protein kinase domain 337 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02403 Lapu-Chr7 40279193 40282045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02403 269 624 Receptor kinase-like Gene Family AT4G18250 53.005 7.42e-127 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lapu7g02403 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02403 - - pvu:PHAVU_007G030100g 845.114