Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02402 ATGATTAATTCTGCTAAACAATATCCAGTTTCCGCCTCGGTAGTAGCTGGAGTCGTAGTTTTGGTGATGATCCTGGCATGCTGCTTCAGGACAAAGATCAGCTCTCTCAATACTCTTTTGTTTCAGACGGATCCAACCCGTCGGATTATTGAGGGGTTTCTGAAGGATTATGGACCCCTTCCTACAGCCAGGTATAGTTATTCGGAGGTTAAGAAAATGACCAACTCTTTCAGAAACAAATTAGGCCAAGGGGGATTCGGTAGTGTATATAAAGGGAAGTTACAAGACAAACATGTAGTTGCGGTGAAGATTTTAAACAGATCAGAAGGCAATGGAGAAGAATTCATTAACGAAGTGGGAAGCATTAGCAGGACTTCACATGTTAACATTGTTAGACTTTTGGGATTTTGTTTGGATGGGTCTAAACGTGCTCTAATATATGAGTATATGCCTAATGGATCTCTAGATAAGTTTATATTTGATGAGAAAAATTCATTGCGGACTTCTTGCCAATTGGATGACAAAATATTGTATGATATTGCAATTGGCATTGCTCGTGGATTAGAGTACTTACACAGAGGTTGCAACACTAGAATCTTGCATTTTGACATAAAACCTCACAACATATTACTAGATGATGATTTCTGCCCAAAAACATCAGATTTTGGACTTGCAAAACTTTGTCCAAGAAAAGAAAGTGCTGTCTCAATATTTGGTGCTAGAGGAACTGCAGGGTATATTGCTCCAGAACTTCTGCTTATTGTTTCAGCTCAGAATGGAAAATGTCCACAATCTTTCGACTGTGGATTTCTTGGCCAGATTGGGTTTCCTTTCACAACCACTGAGCAACCACACTGCGGCTTATTGCCCTTACATGGCTGTCAACATCCTTCTGACGCTCACAAGACTGTCCAACTAGGCACCTCCTCATCAACCTCGTACCCTGTTGTATGGGTAGAACCTCGTACCATAATTGTCTCAGATGAGGAACAAGATCGCTATTTGCGAAAGGGAAGTTGCAAAGCGTTCAGCAAGAATTTCACTCTTCCTCACACCTCTCCTTTAGCTTCTTTCCACAACATATATAGTATCACTATCTTCAGATGCAATCACTCCCTCAAACCCACCCTTCCCAAACATTTTCATAAATATTCAAACTGTTCTGAGTACGATATCTACTATGGCTATCCAAATACAGTATCTCCTCTGGATTTCAACTGGCCGAACTCTTTAGCACCATGTTCAACCATTCAGCTTGCTATAGAAGCAAATTCTACCGACGACCCATTTCAATTTCTAGTTAGTAATATCGCTATTGAAGTAAAGTTATCTGAAGAATGTGAAAGGTGTCTTGGAGATGGAAAAGGCCAGTGTTTACTTGACACTAAAGGAAAATTCTATTGCGCAACAGCTGTTACAGTTGCTTTATTGCTAGCGATGGTCAAGATCTACTATACAAGACGGAAGAAGCAAAATCCAACAAATCAACGGATTGAGGTCTTTCTGAAAAAACACGGAGCCCGTCAGACTAAGAGGTATGGTTATTCTGAGATAAAGAAAGTGACCAACTGTTTCAGAAACAAACTAGGCCAAGGAGGATTCGGTAGTGTATACAAGGGAAAATTACAGGATGGACGTTATGTTGCAGTGAAGATCCTAAACAACTCAGAAGATGATGGAGAGGAATTCATCAATGAAGTTGCTAGTATTAGCAGAACTTCTCATATTAACATTGTTACGCTTTTGGGGTTCTGTTGCGAAGGTCCTAAACGAGCTTTGGTTTATGAGTTTATATCCAATGGATCACTTGAAAAATTTATCTTTCAAGAAAATGCTCTAATGACAGATCATCAATTGGACTACCAAATGTTGTATCATATTGTAATCGGTGTTGCTAGGGGACTAGAATACCTGCATAAAGGCTGCACTACCAGAATTTTACACTTTGACATTAAACCTCATAACATTCTGTTGGATGAGAACTTCAATCCTAAGATTTCAGATTTTGGTCTAGCAAAAATTTGCACCAGAAAAGAAAGTATGGTTTCAATATTTGGAGCTAGAGGAACAGCGGGCTATATTGCTCCAGAAGTTTTTTCCAGAAATTTTGGTGTAGTGTCACATAAATCAGATGTTTACAGTTATGGAATGATGATCTTAGAAATGATTGGAGGAAGAAAGAACACTATGACTGGGTTAGACCCCTCGAGTTACTTTCCCGATTGGATATACACTCGTCTGGAATCAAACCAGGAACTTGGTTTGCAAAACATGCCAAATGTAAGTGATGAAAAAATGGTAAGAAAGATGGCAATTGTGGGCTTATGGTGCATACAAACTCATCCTTCAAACCGACCTGCCATAAGTAAAGCGTTGGAAATGTTAGAAAGCAAAGTTGAGTTATTGCAAATTCCACCTAAACCTTTATTATCTTCTCCTTCAACCTCTCCCATCCATTTATTAAGTGAGACATTGTAA 2478 0.3923 MINSAKQYPVSASVVAGVVVLVMILACCFRTKISSLNTLLFQTDPTRRIIEGFLKDYGPLPTARYSYSEVKKMTNSFRNKLGQGGFGSVYKGKLQDKHVVAVKILNRSEGNGEEFINEVGSISRTSHVNIVRLLGFCLDGSKRALIYEYMPNGSLDKFIFDEKNSLRTSCQLDDKILYDIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDDDFCPKTSDFGLAKLCPRKESAVSIFGARGTAGYIAPELLLIVSAQNGKCPQSFDCGFLGQIGFPFTTTEQPHCGLLPLHGCQHPSDAHKTVQLGTSSSTSYPVVWVEPRTIIVSDEEQDRYLRKGSCKAFSKNFTLPHTSPLASFHNIYSITIFRCNHSLKPTLPKHFHKYSNCSEYDIYYGYPNTVSPLDFNWPNSLAPCSTIQLAIEANSTDDPFQFLVSNIAIEVKLSEECERCLGDGKGQCLLDTKGKFYCATAVTVALLLAMVKIYYTRRKKQNPTNQRIEVFLKKHGARQTKRYGYSEIKKVTNCFRNKLGQGGFGSVYKGKLQDGRYVAVKILNNSEDDGEEFINEVASISRTSHINIVTLLGFCCEGPKRALVYEFISNGSLEKFIFQENALMTDHQLDYQMLYHIVIGVARGLEYLHKGCTTRILHFDIKPHNILLDENFNPKISDFGLAKICTRKESMVSIFGARGTAGYIAPEVFSRNFGVVSHKSDVYSYGMMILEMIGGRKNTMTGLDPSSYFPDWIYTRLESNQELGLQNMPNVSDEKMVRKMAIVGLWCIQTHPSNRPAISKALEMLESKVELLQIPPKPLLSSPSTSPIHLLSETL* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02402 825 Gene3D Transferase(Phosphotransferase) domain 1 150 284 - -
Lapu7g02402 825 Gene3D Transferase(Phosphotransferase) domain 1 598 803 - -
Lapu7g02402 825 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Lapu7g02402 825 FunFam serine/threonine-protein kinase PBS1-like 55 149 - -
Lapu7g02402 825 ProSiteProfiles Protein kinase domain profile. 75 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02402 825 ProSiteProfiles Protein kinase domain profile. 523 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02402 825 ProSitePatterns Protein kinases ATP-binding region signature. 81 103 IPR017441 GO:0005524
Lapu7g02402 825 FunFam Os07g0541700 protein 150 243 - -
Lapu7g02402 825 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Lapu7g02402 825 Pfam Protein kinase domain 79 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02402 825 Pfam Protein kinase domain 527 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02402 825 FunFam PR5-like receptor kinase 598 807 - -
Lapu7g02402 825 PANTHER RUST RESISTANCE KINASE LR10-RELATED 495 812 IPR045874 GO:0004672
Lapu7g02402 825 FunFam S-receptor-like serine/threonine-protein kinase 489 597 - -
Lapu7g02402 825 Gene3D Phosphorylase Kinase; domain 1 483 597 - -
Lapu7g02402 825 SUPERFAMILY Protein kinase-like (PK-like) 506 796 IPR011009 -
Lapu7g02402 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Lapu7g02402 825 SUPERFAMILY Protein kinase-like (PK-like) 57 255 IPR011009 -
Lapu7g02402 825 SMART serkin_6 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02402 825 SMART serkin_6 75 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02402 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Lapu7g02402 825 Gene3D Phosphorylase Kinase; domain 1 58 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02402 Lapu-Chr7 40266039 40272659 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02402 420 822 Receptor kinase-like Gene Family AT5G38260 45.080 3.19e-118 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lapu7g02402 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02402 - - pvu:PHAVU_007G030100g 935.636