Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02401 ATGGTCTTGGTTTGCTGCTGCTTCAGGAGAAAGATCTTTTATCCTTTGTTTTGGAGGGAAAATCCAACTCATCGCATTATCGAGGACTTTTTGAATGAACATGGGCCCCTTCCCACATCCAGGTACAGTTATGTAGAGGTTAAGAACATGACCAACTCTTTCAGAAACAAATTAGGCCAAGGGGGATTCGGTAGCGTATACAAAGGGAAATTACATGATGGAAGTGTTGTTGCAGTGAAAATTTTAAGTATATCTAAAGGCAATGGAGAAGAATTCATCAATGAAGTTGCGAGTATTAGTAGGACTTCACATGTTAATATCATTAGACTTTTAGGATTTTGTTTTGACAATACTCATCGGGCTCTAATATACGAGTTTATGCCTAATGGATCTCTTGACAAGTTCATCTATGAAGAGAAAAATGCATCAGAGGATGTTCACCAACTGGATTGGAAAATATTGAACGATATTGCAACTGGCATTGCTCGTGGATTAGAGTACTTGTATAGAGGTTGCAACACTAGAATTTTACATTTTGACATAAAACCTCACAACATATTACTGGACGAGGATTTCTGTCCAAAAATTGCAGATTTTGGGCTTGCAAAATTGTGTCCGAGAAAAGAAAGTATGGTATCTATATTTGGTGCCAGAGGAACTGCAGGCTATATTGCTCCAGAAGTATTTTCCAGAAACTTTGGTGCTGTGTCACACAAGTCAGATATTTATAGTTATGGAATGATGGTCTTAGAAATGGTTGGAAGAAGAAAGAATATTAATACAAAAGTAGACCGGTCGAGTGAAATATATTTTCCTCATTGGATTCACAATCGTCTTGAATCAAATTCAGAGCTTGGTTTAGAAAATGTAAGAAATGAAAGTGAGGACCAAATGGTGAGAAAGATGACAATAGTGGGCTTGTGGTGCATACAAACTCATCCTTCAACTCGACCAACCATAAGTAAAGTGGTGGAAATGTTAGAAAGTGAAGTTGATTTATTGCAAATTCCACCTAAACCATTTTTATCTTCTCCTTCAACATCTCCGGCCAATTTGTCTTATGAACAATTTTACTGCTTAGAGTTGATTTTTAGGTTCTGTCTTTGCTTCCACCCACCCAACATTTCATTAGAAACCTTCAGAAAAATGGAAAACTCTTTGTGCTTACAGGCATCACTCAGCAGGATGGGATTTCAATTTCGGATGAAGATTTTCATAAGCGTTTACAAAACA 1233 0.3715 MVLVCCCFRRKIFYPLFWRENPTHRIIEDFLNEHGPLPTSRYSYVEVKNMTNSFRNKLGQGGFGSVYKGKLHDGSVVAVKILSISKGNGEEFINEVASISRTSHVNIIRLLGFCFDNTHRALIYEFMPNGSLDKFIYEEKNASEDVHQLDWKILNDIATGIARGLEYLYRGCNTRILHFDIKPHNILLDEDFCPKIADFGLAKLCPRKESMVSIFGARGTAGYIAPEVFSRNFGAVSHKSDIYSYGMMVLEMVGRRKNINTKVDRSSEIYFPHWIHNRLESNSELGLENVRNESEDQMVRKMTIVGLWCIQTHPSTRPTISKVVEMLESEVDLLQIPPKPFLSSPSTSPANLSYEQFYCLELIFRFCLCFHPPNISLETFRKMENSLCLQASLSRMGFQFRMKIFISVYKT 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02401 411 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 345 IPR045874 GO:0004672
Lapu7g02401 411 FunFam PR5-like receptor kinase 127 339 - -
Lapu7g02401 411 Gene3D Transferase(Phosphotransferase) domain 1 127 341 - -
Lapu7g02401 411 SUPERFAMILY Protein kinase-like (PK-like) 33 328 IPR011009 -
Lapu7g02401 411 Gene3D Phosphorylase Kinase; domain 1 31 126 - -
Lapu7g02401 411 ProSiteProfiles Protein kinase domain profile. 52 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02401 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Lapu7g02401 411 FunFam serine/threonine-protein kinase PBS1-like 26 126 - -
Lapu7g02401 411 SMART serkin_6 52 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02401 411 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524
Lapu7g02401 411 Pfam Protein kinase domain 56 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02401 Lapu-Chr7 40260036 40265157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02401 41 343 Receptor kinase-like Gene Family AT4G18250 58.521 6.82e-126 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lapu7g02401 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02401 - - vum:124822104 661.759