Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02395 ATGGGGACAATTTCCTTTCCCTTCACCACCTTTGAACACCAGAATTGTGGTGTTTTGGCAATTCATGGCTGTAATAATCCTAACCAAACAGCACTCAAGCATGTCCAGTTGAGCAAAGGAGGAAAATTTTTACAAGTTACACAAGTTAATACTCGGCGGTACACAGATATTATTTCCATTGTGGATGAGGATTTCGACAAGCTTCTACAAAATTTTAACTGTAATGCCTTGGGCTATAATATCACCATCCCTCCCTCCTCCCCTTTCGGTTATTTTTATCTGCAAAACAATATAACAGCCTTCAACTGCAGCCGCGATGATAAACTCAACCTTTCAAATGATTTCATCAACTATACTCGATGTCATGCATTTGATTTTTATTTTGCCCCTTCATCCTCTGATCAGTACCACCTACGCAACTTCACAAACTCATGTTCAATGGTTCAGCTTCCCGTCAGACAAGAATCCCAGTTCTTCAAAGACCCATTTGGATTTTTAACTCCTCAAATTACCCTTCAATTCCAGTTTTCAAATGACTGTGTGCAGTGTCGACGAAGACAGGGCAATTGCCGACTTAACAGCAACGCAAAAGTATATTGCGACGTCAGAAACACTTGTGCTGATTCCTTCCAAAATCCAGATACAGAGAGTGACAGGATCTTCTTTGGGGTACCCGTCTTCTCCTATAAGGAACTTCAAGAAGCAACCAACAATTTTGACCCCACTAGAAAGCTCGGAGATGGAGGCTTTGGCATTGTTTTCTACGGGACACTGAGAGATGGAAGGGAAGTTGCAATCAAACATCTATTTGAGCACAATTACAAGAGGGTGGAACAGTTTATGAATGAAATTGAGATCCTTACTCGCTTACGCCACAGAAATCTAGTGTCCCTTTATGGCTGCACTTCACGTCACGCCCACGAGCTATTGCTTGTGTATGAATACATTCCAAATGGCACTGTTGCTAGCCATCTCCATGGTGAATTAGCAAGGGTTGGTTTGCTGACATGGCCTATTCGAATGCAAATTGCCGTAGACACTGCCACTGCATTGTCCTATCTCCATGCTTCCAACATCATTCACCGTGATGTGAAAACCAATAACGTTCTACTTGACATGAACTTTTCCGTTAAGGTAGCAGATTTTGGGCTTTCAAGATTGCTCCCCAATGATGTAAGTCACGTGTCCACAGCTCCACAAGGGTCTCCGGGGTATCTTGATCCTGAATATTTCCAATGCTATAGACTCACTGACAAGAGTGACGTGTATAGCTTTGGGGTTGTGCTGATGGAGCTGATATCATCCATGCCAGCAGTTGATGCAGCCAGGGAAAGGGATGATGAAGTTAACTTAGCAAATTTTTGCATGAAAAAGATTCATAAAGGAAAACTTAGTGAGCTTGTAGACCCATCCTTTGGGTTTGAGTCAGAGCAAGCAGTTAAAAGGATGGTGACTTCAGTAGCAGAATTGGCCTTTCGGTGTGTGCAAGGAGACAAAGAATTAAGGCCTTCTATGGATCAAGTTCTGGAAGCCCTCAAGAAAATTCAAAGTGGGAATTATGAGTCTGAGAATCTAGAGAAAGGAGATGATGGTGGTAATGTTATCTCGTCTACATCCAGCGAAGAAGTGCAACCACCACCATCCGCTTCGCGGAACTCGGGTCAAATTGGAATTTTAAAGAATAATAAGCTATTTTCGCCAAGGTCCTTCACTGAAAAATAG 1722 0.4251 MGTISFPFTTFEHQNCGVLAIHGCNNPNQTALKHVQLSKGGKFLQVTQVNTRRYTDIISIVDEDFDKLLQNFNCNALGYNITIPPSSPFGYFYLQNNITAFNCSRDDKLNLSNDFINYTRCHAFDFYFAPSSSDQYHLRNFTNSCSMVQLPVRQESQFFKDPFGFLTPQITLQFQFSNDCVQCRRRQGNCRLNSNAKVYCDVRNTCADSFQNPDTESDRIFFGVPVFSYKELQEATNNFDPTRKLGDGGFGIVFYGTLRDGREVAIKHLFEHNYKRVEQFMNEIEILTRLRHRNLVSLYGCTSRHAHELLLVYEYIPNGTVASHLHGELARVGLLTWPIRMQIAVDTATALSYLHASNIIHRDVKTNNVLLDMNFSVKVADFGLSRLLPNDVSHVSTAPQGSPGYLDPEYFQCYRLTDKSDVYSFGVVLMELISSMPAVDAARERDDEVNLANFCMKKIHKGKLSELVDPSFGFESEQAVKRMVTSVAELAFRCVQGDKELRPSMDQVLEALKKIQSGNYESENLEKGDDGGNVISSTSSEEVQPPPSASRNSGQIGILKNNKLFSPRSFTEK* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02395 573 Gene3D Phosphorylase Kinase; domain 1 211 315 - -
Lapu7g02395 573 ProSiteProfiles Protein kinase domain profile. 239 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02395 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 359 371 IPR008271 GO:0004672|GO:0006468
Lapu7g02395 573 Pfam Protein tyrosine and serine/threonine kinase 242 512 IPR001245 GO:0004672|GO:0006468
Lapu7g02395 573 MobiDBLite consensus disorder prediction 520 573 - -
Lapu7g02395 573 FunFam Wall-associated receptor kinase-like 20 316 525 - -
Lapu7g02395 573 CDD STKc_IRAK 245 515 - -
Lapu7g02395 573 Gene3D Transferase(Phosphotransferase) domain 1 316 527 - -
Lapu7g02395 573 SMART serkin_6 239 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02395 573 ProSitePatterns Protein kinases ATP-binding region signature. 245 267 IPR017441 GO:0005524
Lapu7g02395 573 SUPERFAMILY Protein kinase-like (PK-like) 222 515 IPR011009 -
Lapu7g02395 573 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 551 IPR044652 GO:0004672
Lapu7g02395 573 MobiDBLite consensus disorder prediction 531 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02395 Lapu-Chr7 40222561 40225831 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02395 6 573 Receptor kinase-like Gene Family AT1G25390 41.909 7.39e-146 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lapu7g02395 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02395 - - gmx:100778085 833.943