Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02394 ATGGCAGGTATAGGTGGCGGTGGAGTATGCAATGTGATAACGTTGGTGTTGATCCTGGCATTACGGCGCTGCAAACGGAAATATGGTTGTGCAGTAGCTCGATTCGAATCAAGAAACACTCCTGGTGATCCTCACGACAATCCCGGCATAATGACTGATAGGATCTTCTTTGGAGTACCCGTTTTCTCTTATAAGGAGCTTCAAGAAGCAACAAACAATTTTCACTGCACCAGAAAGCTAGGGGAGGGAGGATTTGGAAGCGTTTACTATGGTAAACTGGAAGATGGACGGGAAGTTGCAGTGAAATTGTTGTTCGAGAACAACTGCAGGAGAGTGCAACAATTTATGAACGAAATTGAGATTCTGACTCACTTGCGACACAGGAACCTGGTCTCCCTCTACGGTTGCACTTCGCGTCACAGCCGCGAGTTACTGCTCGTGTACGAATACGTCCCAAACGCCACCCTTGCTTACCATCTCAACGGAAGGGACAATTTGCTGACGTGGCCAATTCGGATGCAAATTGCGGTAGAAACCGCCACTGCGTTGGCTTATCTCCACGCTTCCGACGTCATTCACCGTGACGTCAAAAGCAGCAACATTCTACTGGGCACAAATTTTTTGGTTAAGGTAGGTGATTTTGGGCTTTCGAGGTTGCTTCCGACGGATGCAAGCCACGTGTCAACCGCTCCACAGGGGACTCCGGGGTACCTTGACCCTGGGTATTTCCAGCACTACCAGCTGACGGAGAAGAGTGACGTGTTTAGCTTTGGGGTTGTGGTTGTTGAGCTGATATCATCGTTGCCTGCCGTTGACGCTGCCAGGGATTGTGATGAGATAAATCTGGCAAGTCTTGCCATTAAGAAGATTCAAAATGGGAAAGTGAGTGAGCTGGTGTGCCAATCTCTTGGTTTTGAGTCGGACCAAGAAGTGAAAAGGATGGTGACTTCAGTGGCGGAATTGGCCTTCCAGTGTGTGCAGGCAGACAGGCAACTAAGACCTTCCATGGATGAAGTTGTGGCAGTCCTACATAAAATTCAAAATGAGAATTCTGACTGA 1059 0.4844 MAGIGGGGVCNVITLVLILALRRCKRKYGCAVARFESRNTPGDPHDNPGIMTDRIFFGVPVFSYKELQEATNNFHCTRKLGEGGFGSVYYGKLEDGREVAVKLLFENNCRRVQQFMNEIEILTHLRHRNLVSLYGCTSRHSRELLLVYEYVPNATLAYHLNGRDNLLTWPIRMQIAVETATALAYLHASDVIHRDVKSSNILLGTNFLVKVGDFGLSRLLPTDASHVSTAPQGTPGYLDPGYFQHYQLTEKSDVFSFGVVVVELISSLPAVDAARDCDEINLASLAIKKIQNGKVSELVCQSLGFESDQEVKRMVTSVAELAFQCVQADRQLRPSMDEVVAVLHKIQNENSD* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02394 352 SUPERFAMILY Protein kinase-like (PK-like) 55 347 IPR011009 -
Lapu7g02394 352 SMART serkin_6 74 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02394 352 Gene3D Transferase(Phosphotransferase) domain 1 151 352 - -
Lapu7g02394 352 Pfam Protein tyrosine and serine/threonine kinase 75 342 IPR001245 GO:0004672|GO:0006468
Lapu7g02394 352 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 55 150 - -
Lapu7g02394 352 ProSiteProfiles Protein kinase domain profile. 74 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02394 352 PIRSF ILK 61 352 - -
Lapu7g02394 352 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 9 350 IPR044652 GO:0004672
Lapu7g02394 352 FunFam Wall-associated receptor kinase-like 20 151 352 - -
Lapu7g02394 352 Gene3D Phosphorylase Kinase; domain 1 52 150 - -
Lapu7g02394 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Lapu7g02394 352 ProSitePatterns Protein kinases ATP-binding region signature. 80 102 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02394 Lapu-Chr7 40216160 40217292 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02394 3 349 Receptor kinase-like Gene Family AT1G25390 60.452 1.08e-144 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lapu7g02394 PK_Tyr_Ser-Thr 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02394 - - gmx:100789695 538.495