Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02392 ATGTTTGCTAGACAATTCTTGACATTCCTAATGCTCTCCCTTCTTAATTTCAAATCAGTAATAATATATTTCTCACAGCTTCTGCTTATTGTTTCAGCTCAGAATGGAAAATGTCCACAATCTTTCGACTGTGGATTTCTTGGCCAGATTGGGTTTCCTTTCACAACCACTGAGCAACCACACTGCGGCTTATTGCCCATACATGGCTGTCAACATCCTTCTGACGCTCACAAGACTGTCCAACTAGGCACCTCCTCATCAACCTCGTACCCTGTTGTATGGGTAGAACCTCGTACCATAATTGTCTCAGATGAGGAACAAGATCGCTATTTGCGAAAGAGAAGTTGCAAAGCGTTCAGCAAGAATTTCACTCTTCCTCACACCTCTCCTTTAGCTTCTTTCCACAACAAATATAGTATCACTATCTTCAGATGCAATCACTCCCTCAAACCCACCCTTCCCAAACATTTTCATAAATATTCAAACTGTTCTGAGTACGATATCTACTATGGCTCTCCAAATACAGTATCTCCTCTGGATTTCAACTGGCCGAACTCTTTAGCACCATGTTCAACCATTCAGCATGCTGTAGAAGCAAATTCTACCGACGACCCATTTCAATTTCTAGTTAGTAATATCGCTATTGAAGTAAAGTTATCTGAAGAATGTGAAAGGTGTCTTGGAGATGGAAAAGGCCAGTGTTTACTTGACACTAAAGGAAAATTCTATTGCGCAACAGAGCATAGGAATTTGGCATGGAAGTTAGTTCTAGGTATTGGACTCCCGGGCATTCTTGTAATTGGGCTGCTAATTATATGGCACCGCAAACCTAAATGTGTGCTTCATTTCTTTTCAAATCCAAACCCAGAAACTGCTAGTATCTTCTTTGGGGTCCCTGTCTTCACCTATAAGGATCTTGTAAAAGCAACAAAAGGTTTTGATCGTTCAAGAGAACTAGGAGAAGGAGGCTTTGGGATTGTTTACTATGGAAAACTCCAGGATGGACGTGAAGTTGCTGTGAAGCGCCTATACGAGCACAACTGTAGGAGAGTAGAACAGTTCATGAATGAAATCAAGATCCTCACACGCTTGCGCAACAAAAACTTGGTCTCTCTCTATGGCTGCACTTCACGCGAGAGCCGTGAACTACTGCTTGTTTATGAATACATTTCAAATGGAACTGTGGCCAGCCACCTCCATCCTCGTGAATCCACGAGTCATGGCTCTTTGCCATGGCTTATACGAATGAAAGTGGCCATTGAGACTGCTACTGCATTGGCCTATCTCCATGCCTCTGACATCATTCACCGTGATGTCAAAACCACTAACATTCTGCTTGACAGCAATTTTTGTGTTAAAGTTGCAGATTTTGGATTGTCGAGACTGTTCCCACTTGACGCCACTCATGTTTCCACTGCTCCACAAGGCACCCCTGGCTATGTTGATCCTGAATATCACCGATCCTACCAACTTACCGACAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTATTGAGTTGATATCATCTATGCCAGCAATGGATCTGAACCGGTATAAGGATGAAATAAACTTGGGAGATCTAGCCATAAGGAAGATTCAAAAAAATGCAATTGCTGAGCTGGTGGATCATTCCCTTGGTTTTGAGTCGAATGGTGATGTTAAAAGACAAATAACTGCAGTAGCAGAATTGGCTTTTCAATGCTTGCAACGGGACAAAGAATTGAGACCCTGCATGGATGAAGTGTTGGAGGTGCTGAAGAGAATAGAAAGTCGGAAGGATGAGGAAAGACATGTAGAAGAAGTGCTTGTTCAGGAGGATGAAGACCCATCATCACCATCTTCAGCAGATCACGATGAAGTGGAATTGTTGATGAATATGAAGTTGCCACCTTCGCCAAGGTCCGTGACAGATAAATGGAACAGTCAATCCAGTTCCAATGTCAGTGGTCAATAA 1956 0.4259 MFARQFLTFLMLSLLNFKSVIIYFSQLLLIVSAQNGKCPQSFDCGFLGQIGFPFTTTEQPHCGLLPIHGCQHPSDAHKTVQLGTSSSTSYPVVWVEPRTIIVSDEEQDRYLRKRSCKAFSKNFTLPHTSPLASFHNKYSITIFRCNHSLKPTLPKHFHKYSNCSEYDIYYGSPNTVSPLDFNWPNSLAPCSTIQHAVEANSTDDPFQFLVSNIAIEVKLSEECERCLGDGKGQCLLDTKGKFYCATEHRNLAWKLVLGIGLPGILVIGLLIIWHRKPKCVLHFFSNPNPETASIFFGVPVFTYKDLVKATKGFDRSRELGEGGFGIVYYGKLQDGREVAVKRLYEHNCRRVEQFMNEIKILTRLRNKNLVSLYGCTSRESRELLLVYEYISNGTVASHLHPRESTSHGSLPWLIRMKVAIETATALAYLHASDIIHRDVKTTNILLDSNFCVKVADFGLSRLFPLDATHVSTAPQGTPGYVDPEYHRSYQLTDKSDVYSFGVVLIELISSMPAMDLNRYKDEINLGDLAIRKIQKNAIAELVDHSLGFESNGDVKRQITAVAELAFQCLQRDKELRPCMDEVLEVLKRIESRKDEERHVEEVLVQEDEDPSSPSSADHDEVELLMNMKLPPSPRSVTDKWNSQSSSNVSGQ* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02392 651 Gene3D Phosphorylase Kinase; domain 1 287 389 - -
Lapu7g02392 651 MobiDBLite consensus disorder prediction 600 624 - -
Lapu7g02392 651 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 20 645 IPR044652 GO:0004672
Lapu7g02392 651 CDD STKc_IRAK 319 589 - -
Lapu7g02392 651 ProSiteProfiles Protein kinase domain profile. 313 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02392 651 SUPERFAMILY Protein kinase-like (PK-like) 298 618 IPR011009 -
Lapu7g02392 651 Gene3D Transferase(Phosphotransferase) domain 1 390 605 - -
Lapu7g02392 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Lapu7g02392 651 Pfam Protein tyrosine and serine/threonine kinase 316 585 IPR001245 GO:0004672|GO:0006468
Lapu7g02392 651 SMART serkin_6 313 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02392 651 MobiDBLite consensus disorder prediction 600 651 - -
Lapu7g02392 651 MobiDBLite consensus disorder prediction 635 651 - -
Lapu7g02392 651 FunFam Wall-associated receptor kinase-like 20 390 599 - -
Lapu7g02392 651 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02392 Lapu-Chr7 40203328 40207329 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02392 40 646 Receptor kinase-like Gene Family AT1G25390 47.125 9.60e-169 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lapu7g02392 PK_Tyr_Ser-Thr 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02392 - - gmx:100790240 867.07