Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02390 ATGATAAACCAAAACACCCTATTTTTTATCCTTAAACCCCTCTCTTCTCCCATCACCCATTCCTACATCATCGTCTTCTTTCTCCTTGCCCAAATCACTTCCTGTCAAGTCGACCCTAAATTCCTTTCATGTGCACCCAAAACCTGTCCCAACAACAACCAAAATATAAGCTATCCTTTTTACATCCAAGGAGCACAAGAACCTTATTGTGGGAATCCCGGTTTTGAAATCTCTTGTGCCCCTGATGGCTTCCCTATCCTCAATCTCTCTCACACCCAATACTTCATTCATCAAATTTTCTACCAAAATCAGTCCCTGCGAGTGTCCAATGCCGCCTTCTCAACTTTGCAATCAAACGCCACCAAAGGTTGTCTTTTTCCAACTCAGAATCTCACTCTTCCTCCTACTAACGAGTTCCGTGTTGCTCCTAATCAAACGGACATGTTATTGTTCTACGGCTGTGACGCACCTTCGACTCACGAGCACAGAGTTGGGTGTTCTGCACAAAATGAAACGAGTTCAGTTTTGGCATTGGATAAAAGGGATAAAAATATAAGCTTTGTGGCGAAGAATTGCAAGGGTGGGGTGGTGGATACCGTGGTGGAAGATGGAACAGGAGGAGTTGGAGAAGCGTTGAGAAAAGGGTTATTGCTGATGTGGACGGCAAGTAGCTGCGCCTTGTGCAACAGCACCGGAGGGAGGTGCGGTTTCGATCCAGATATTTTCACTTTCAGGTGTTATTGCACTGACAGAGTTCATTCTGCCAAATGTGATGCTGATGATCCAGCTGCAGTTACGAAGAAAGGGTCGATTTCGAAGCTCAGACTGGCTTTAGGTTTAGGTATTGGACTCCTATGTATGATGCTAATTGGATTGTTATTTTTCTTTCTACGCAACAAACGAAAACATGCTAGCTCAGGTGCACAATTGGAGTCGAGAGATTCTTATTCTGATTCCTCCTCCAATCCTCATCGAGCTAGTAGTGGCGAATACTTCGGAGTTCCGCTCTTCTCTTACGCGCAGCTTAAAGAAGTCACAAACAATTTCGACCATGCTCAGGAACTTGGAGATGGAGGCTTCGGTACTGTCTACTATGGGAAACTCCCAGATGGAAGGGAAGTTGCGGTGAAGCGCCTATACGAGCACAACTGGAGGCGAGTAGAACAGTTCATGAACGAAGTTAAAATCCTCACACGTTTGCGTCACAAAAATCTTGTGTCACTCTACGGCTGCACTTCACGGCACAGCCGTGAACTCCTACTTGTGTACGAATACATCTCAAACGGCACCGTAGCATGTCATCTCCACGGTGGATTAGCCAAGCCTGGCTTGCTACCATGGCCTACTCGTATCAAAATTGCCATAGAAACTGCCAGTGCACTGGCTTATCTCCACGCCTCAGACATCATCCACCGTGACGTGAAAACAAACAACATACTCCTGGACCACAACTTTTGTGTCAAGGTAGCAGATTTTGGGCTTTCAAGAGACTTCCCAAACGATGTCACACATGTCTCCACAGCTCCACAAGGGTCCCCGGGTTACCTTGACCCCGAATATTACAGCTGCTACCAGCTTACTAGCAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTATCGAGCTGATATCATCCAAGCCTGCTGTTGATATGAACAGGAGCAGGGATGAGATTAACTTGTCAAATCTAGCAGTAAGGAAGATTCAAGAAAGTGCAATTGATGAGCTGGTAGATCCTTGTCTTGGTTTTGATTCGAACGATGGGGTTAAGGGGATGATAGTTTCAGTGGCAGGGTTGGCTTTACAGTGTTTGCAGAGGGAAAAGGAGTTGAGACCATCGATGGATGAGGTGTTGCATGAACTGCAGAGAATCGAAAGTGGAAAGGATGAGGTAGATGTTGATAATGTTGAAGTTTCAGATAGTCTTGCACATTCTCCACCACCAGCCTCACCCGAGTGGGATGAAGTTGTATTGTTGAAGAATATGAAGCCTATTTCCCCAGACACTGTCCATGATAAATGGGAAAGTAAATGTACTACACCTAATACAAGTGCCTAA 2058 0.4543 MINQNTLFFILKPLSSPITHSYIIVFFLLAQITSCQVDPKFLSCAPKTCPNNNQNISYPFYIQGAQEPYCGNPGFEISCAPDGFPILNLSHTQYFIHQIFYQNQSLRVSNAAFSTLQSNATKGCLFPTQNLTLPPTNEFRVAPNQTDMLLFYGCDAPSTHEHRVGCSAQNETSSVLALDKRDKNISFVAKNCKGGVVDTVVEDGTGGVGEALRKGLLLMWTASSCALCNSTGGRCGFDPDIFTFRCYCTDRVHSAKCDADDPAAVTKKGSISKLRLALGLGIGLLCMMLIGLLFFFLRNKRKHASSGAQLESRDSYSDSSSNPHRASSGEYFGVPLFSYAQLKEVTNNFDHAQELGDGGFGTVYYGKLPDGREVAVKRLYEHNWRRVEQFMNEVKILTRLRHKNLVSLYGCTSRHSRELLLVYEYISNGTVACHLHGGLAKPGLLPWPTRIKIAIETASALAYLHASDIIHRDVKTNNILLDHNFCVKVADFGLSRDFPNDVTHVSTAPQGSPGYLDPEYYSCYQLTSKSDVYSFGVVLIELISSKPAVDMNRSRDEINLSNLAVRKIQESAIDELVDPCLGFDSNDGVKGMIVSVAGLALQCLQREKELRPSMDEVLHELQRIESGKDEVDVDNVEVSDSLAHSPPPASPEWDEVVLLKNMKPISPDTVHDKWESKCTTPNTSA* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02390 685 SMART serkin_6 349 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02390 685 ProSiteProfiles Protein kinase domain profile. 349 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02390 685 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 22 682 IPR044652 GO:0004672
Lapu7g02390 685 Pfam Wall-associated receptor kinase galacturonan-binding 44 109 IPR025287 GO:0030247
Lapu7g02390 685 Gene3D Transferase(Phosphotransferase) domain 1 426 638 - -
Lapu7g02390 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Lapu7g02390 685 Pfam Wall-associated receptor kinase C-terminal 173 250 IPR032872 -
Lapu7g02390 685 FunFam Wall-associated receptor kinase-like 20 426 633 - -
Lapu7g02390 685 CDD STKc_IRAK 355 624 - -
Lapu7g02390 685 MobiDBLite consensus disorder prediction 666 685 - -
Lapu7g02390 685 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Lapu7g02390 685 Gene3D Phosphorylase Kinase; domain 1 321 425 - -
Lapu7g02390 685 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 321 425 - -
Lapu7g02390 685 SUPERFAMILY Protein kinase-like (PK-like) 330 622 IPR011009 -
Lapu7g02390 685 Pfam Protein tyrosine and serine/threonine kinase 352 620 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02390 Lapu-Chr7 40175419 40186909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02390 244 685 Receptor kinase-like Gene Family AT1G25390 56.889 2.53e-165 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lapu7g02390 PK_Tyr_Ser-Thr 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02390 - - gmx:100792345 863.218